Gene : Glyma.06G028900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR13878:SF60 - CYTOKININ DEHYDROGENASE 5 Genomic Order:  289
Name:  ? Glyma.06G028900 Secondary Identifier:  ? PAC:30551921
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G028900 0.5kb upstream 0.5kb upstream 7320 true Chr06: 2262138-2269457 Glycine max
Glyma.06G028900 0.5kb upstream 0.5kb upstream 500 false Chr06: 2262138-2262637 Glycine max
Glyma.06G028900 0.5kb downstream 0.5kb downstream 7320 true Chr06: 2262638-2269957 Glycine max
Glyma.06G028900 0.5kb downstream 0.5kb downstream 500 false Chr06: 2269458-2269957 Glycine max
Glyma.06G028900 1.0kb upstream 1.0kb upstream 7820 true Chr06: 2261638-2269457 Glycine max
Glyma.06G028900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 2261638-2262637 Glycine max
Glyma.06G028900 1.0kb downstream 1.0kb downstream 7820 true Chr06: 2262638-2270457 Glycine max
Glyma.06G028900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 2269458-2270457 Glycine max
Glyma.06G028900 2.0kb upstream 2.0kb upstream 8820 true Chr06: 2260638-2269457 Glycine max
Glyma.06G028900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 2260638-2262637 Glycine max
Glyma.06G028900 2.0kb downstream 2.0kb downstream 8820 true Chr06: 2262638-2271457 Glycine max
Glyma.06G028900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 2269458-2271457 Glycine max
Glyma.06G028900 5.0kb upstream 5.0kb upstream 11820 true Chr06: 2257638-2269457 Glycine max
Glyma.06G028900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 2257638-2262637 Glycine max
Glyma.06G028900 5.0kb downstream 5.0kb downstream 11820 true Chr06: 2262638-2274457 Glycine max
Glyma.06G028900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 2269458-2274457 Glycine max
Glyma.06G028900 10.0kb upstream 10.0kb upstream 16820 true Chr06: 2252638-2269457 Glycine max
Glyma.06G028900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 2252638-2262637 Glycine max
Glyma.06G028900 10.0kb downstream 10.0kb downstream 16820 true Chr06: 2262638-2279457 Glycine max
Glyma.06G028900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 2269458-2279457 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304076 5265 Fabidae View MSA
124065162 5270 Rosid View MSA
123739641 5271 Pentapetalae View MSA
122791542 5272 Eudicot View MSA
122043536 5273 Angiosperm View MSA
121348628 5274 Embryophyte View MSA
123380946 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.139625 0.0 14.3466 Low  
cufflinks 0.71389 0.0 13.3182   High
cufflinks 0.0510348 0.0 0.868155 Low Low
cufflinks 0.077428 0.0 1.17008 Low Low
cufflinks 0.891512 0.0 14.5321   High
cufflinks 0.265054 0.0 10.5695 Low  
cufflinks 0.347361 0.0 10.8929    
cufflinks 0.092327 0.0 1.21818 Low  
cufflinks 0.607661 0.0 12.2895    
cufflinks 0.005     Low Low
cufflinks 0.01     Low  
cufflinks 0.106     Low  
cufflinks 0.359       High
cufflinks 0.53       High
cufflinks 0.007     Low Low
cufflinks 0.038     Low  
cufflinks 0.055     Low  
cufflinks 0.35       High
cufflinks 0.351       High
cufflinks 0.006     Low Low
cufflinks 0.026     Low  
cufflinks 0.004     Low Low
cufflinks 0.022     Low  
cufflinks 0.021     Low  
cufflinks 0.019     Low  
cufflinks 0.064     Low  

0 Strain