Gene : Glyma.06G029800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10529:SF242 - PROTEIN M03E7.4 Genomic Order:  298
Name:  ? Glyma.06G029800 Secondary Identifier:  ? PAC:30550454
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G029800 0.5kb upstream 0.5kb upstream 6474 true Chr06: 2332083-2338556 Glycine max
Glyma.06G029800 0.5kb upstream 0.5kb upstream 500 false Chr06: 2332083-2332582 Glycine max
Glyma.06G029800 0.5kb downstream 0.5kb downstream 6474 true Chr06: 2332583-2339056 Glycine max
Glyma.06G029800 0.5kb downstream 0.5kb downstream 500 false Chr06: 2338557-2339056 Glycine max
Glyma.06G029800 1.0kb upstream 1.0kb upstream 6974 true Chr06: 2331583-2338556 Glycine max
Glyma.06G029800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 2331583-2332582 Glycine max
Glyma.06G029800 1.0kb downstream 1.0kb downstream 6974 true Chr06: 2332583-2339556 Glycine max
Glyma.06G029800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 2338557-2339556 Glycine max
Glyma.06G029800 2.0kb upstream 2.0kb upstream 7974 true Chr06: 2330583-2338556 Glycine max
Glyma.06G029800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 2330583-2332582 Glycine max
Glyma.06G029800 2.0kb downstream 2.0kb downstream 7974 true Chr06: 2332583-2340556 Glycine max
Glyma.06G029800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 2338557-2340556 Glycine max
Glyma.06G029800 5.0kb upstream 5.0kb upstream 10974 true Chr06: 2327583-2338556 Glycine max
Glyma.06G029800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 2327583-2332582 Glycine max
Glyma.06G029800 5.0kb downstream 5.0kb downstream 10974 true Chr06: 2332583-2343556 Glycine max
Glyma.06G029800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 2338557-2343556 Glycine max
Glyma.06G029800 10.0kb upstream 10.0kb upstream 15974 true Chr06: 2322583-2338556 Glycine max
Glyma.06G029800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 2322583-2332582 Glycine max
Glyma.06G029800 10.0kb downstream 10.0kb downstream 15974 true Chr06: 2332583-2348556 Glycine max
Glyma.06G029800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 2338557-2348556 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122243965 5265 Fabidae Singleton cluster - no MSA
124068452 5270 Rosid View MSA
123746641 5271 Pentapetalae View MSA
122793600 5272 Eudicot View MSA
122046205 5273 Angiosperm View MSA
121344419 5274 Embryophyte View MSA
123426691 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.18277 0.0 4.02941    
cufflinks 2.2656 0.0 7.06455   High
cufflinks 1.83493 0.0 5.86495    
cufflinks 1.82963 0.0 5.87648    
cufflinks 1.29693 0.0 4.37902    
cufflinks 1.1103 0.0 3.80542    
cufflinks 2.82567 0.0 8.5901   High
cufflinks 1.41877 0.0 4.7269    
cufflinks 0.982526 0.0 3.4092   Low
cufflinks 1.081        
cufflinks 0.563       Low
cufflinks 2.493       High
cufflinks 0.924        
cufflinks 0.767        
cufflinks 0.961        
cufflinks 1.229        
cufflinks 0.912        
cufflinks 3.631       High
cufflinks 2.178       High
cufflinks 0.993        
cufflinks 0.495       Low
cufflinks 1.181        
cufflinks 1.513        
cufflinks 0.554       Low
cufflinks 1.235        
cufflinks 0.345       Low

0 Strain