Gene : Glyma.06G017800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR32002:SF6 - PROTEIN NLP4-RELATED Genomic Order:  178
Name:  ? Glyma.06G017800 Secondary Identifier:  ? PAC:30550899
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G017800 0.5kb upstream 0.5kb upstream 5202 true Chr06: 1338317-1343518 Glycine max
Glyma.06G017800 0.5kb upstream 0.5kb upstream 500 false Chr06: 1343019-1343518 Glycine max
Glyma.06G017800 0.5kb downstream 0.5kb downstream 5202 true Chr06: 1337817-1343018 Glycine max
Glyma.06G017800 0.5kb downstream 0.5kb downstream 500 false Chr06: 1337817-1338316 Glycine max
Glyma.06G017800 1.0kb upstream 1.0kb upstream 5702 true Chr06: 1338317-1344018 Glycine max
Glyma.06G017800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 1343019-1344018 Glycine max
Glyma.06G017800 1.0kb downstream 1.0kb downstream 5702 true Chr06: 1337317-1343018 Glycine max
Glyma.06G017800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 1337317-1338316 Glycine max
Glyma.06G017800 2.0kb upstream 2.0kb upstream 6702 true Chr06: 1338317-1345018 Glycine max
Glyma.06G017800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 1343019-1345018 Glycine max
Glyma.06G017800 2.0kb downstream 2.0kb downstream 6702 true Chr06: 1336317-1343018 Glycine max
Glyma.06G017800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 1336317-1338316 Glycine max
Glyma.06G017800 5.0kb upstream 5.0kb upstream 9702 true Chr06: 1338317-1348018 Glycine max
Glyma.06G017800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 1343019-1348018 Glycine max
Glyma.06G017800 5.0kb downstream 5.0kb downstream 9702 true Chr06: 1333317-1343018 Glycine max
Glyma.06G017800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 1333317-1338316 Glycine max
Glyma.06G017800 10.0kb upstream 10.0kb upstream 14702 true Chr06: 1338317-1353018 Glycine max
Glyma.06G017800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 1343019-1353018 Glycine max
Glyma.06G017800 10.0kb downstream 10.0kb downstream 14702 true Chr06: 1328317-1343018 Glycine max
Glyma.06G017800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 1328317-1338316 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301251 5265 Fabidae View MSA
124068649 5270 Rosid View MSA
123748855 5271 Pentapetalae View MSA
122793045 5272 Eudicot View MSA
122051349 5273 Angiosperm View MSA
121350940 5274 Embryophyte View MSA
123428170 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.19309 0.0 40.672   High
cufflinks 2.44251 0.0 11.4781    
cufflinks 3.78175 0.0 13.921    
cufflinks 2.7962 0.0 11.12    
cufflinks 4.55139 0.0 18.234    
cufflinks 9.16142 0.0 35.0268   High
cufflinks 1.29641 0.0 5.71105   Low
cufflinks 4.42434 0.0 15.7282    
cufflinks 5.94199 0.0 25.1613    
cufflinks 0.522        
cufflinks 0.765        
cufflinks 0.999       High
cufflinks 0.822        
cufflinks 0.774        
cufflinks 0.477        
cufflinks 0.418        
cufflinks 0.277       Low
cufflinks 0.555        
cufflinks 0.496        
cufflinks 0.388        
cufflinks 1.102       High
cufflinks 0.63        
cufflinks 0.361        
cufflinks 1.548       High
cufflinks 0.312       Low
cufflinks 0.431        

0 Strain