Gene : Glyma.06G017900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11465 - CATALASE Genomic Order:  179
Name:  ? Glyma.06G017900 Secondary Identifier:  ? PAC:30553641
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax DETOX1-PWY Glycine max pathologic  
Gmax DETOX1-PWY-1 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G017900 0.5kb upstream 0.5kb upstream 5326 true Chr06: 1351502-1356827 Glycine max
Glyma.06G017900 0.5kb upstream 0.5kb upstream 500 false Chr06: 1356328-1356827 Glycine max
Glyma.06G017900 0.5kb downstream 0.5kb downstream 5326 true Chr06: 1351002-1356327 Glycine max
Glyma.06G017900 0.5kb downstream 0.5kb downstream 500 false Chr06: 1351002-1351501 Glycine max
Glyma.06G017900 1.0kb upstream 1.0kb upstream 5826 true Chr06: 1351502-1357327 Glycine max
Glyma.06G017900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 1356328-1357327 Glycine max
Glyma.06G017900 1.0kb downstream 1.0kb downstream 5826 true Chr06: 1350502-1356327 Glycine max
Glyma.06G017900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 1350502-1351501 Glycine max
Glyma.06G017900 2.0kb upstream 2.0kb upstream 6826 true Chr06: 1351502-1358327 Glycine max
Glyma.06G017900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 1356328-1358327 Glycine max
Glyma.06G017900 2.0kb downstream 2.0kb downstream 6826 true Chr06: 1349502-1356327 Glycine max
Glyma.06G017900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 1349502-1351501 Glycine max
Glyma.06G017900 5.0kb upstream 5.0kb upstream 9826 true Chr06: 1351502-1361327 Glycine max
Glyma.06G017900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 1356328-1361327 Glycine max
Glyma.06G017900 5.0kb downstream 5.0kb downstream 9826 true Chr06: 1346502-1356327 Glycine max
Glyma.06G017900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 1346502-1351501 Glycine max
Glyma.06G017900 10.0kb upstream 10.0kb upstream 14826 true Chr06: 1351502-1366327 Glycine max
Glyma.06G017900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 1356328-1366327 Glycine max
Glyma.06G017900 10.0kb downstream 10.0kb downstream 14826 true Chr06: 1341502-1356327 Glycine max
Glyma.06G017900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 1341502-1351501 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040958 5273 Angiosperm View MSA
122309961 5265 Fabidae View MSA
124061092 5270 Rosid View MSA
123744547 5271 Pentapetalae View MSA
122789351 5272 Eudicot View MSA
121344781 5274 Embryophyte View MSA
123424047 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 546.426 0.0 13396.9 High High
cufflinks 72.4267 0.0 379.884 High  
cufflinks 253.004 0.0 3214.89 High High
cufflinks 52.1253 0.0 270.52 High  
cufflinks 31.495 0.0 139.953 High  
cufflinks 54.8583 0.0 280.44 High  
cufflinks 22.0733 0.0 93.7709 High Low
cufflinks 42.2961 0.0 200.663 High  
cufflinks 30.8575 0.0 123.365 High  
cufflinks 3.791        
cufflinks 2.653        
cufflinks 12.769     High High
cufflinks 1.341       Low
cufflinks 0.737       Low
cufflinks 1.913        
cufflinks 11.329     High High
cufflinks 0.881       Low
cufflinks 3.644        
cufflinks 4.62        
cufflinks 13.5     High High
cufflinks 2.551        
cufflinks 10.497     High High
cufflinks 9.015     High  
cufflinks 3.066        
cufflinks 13.503     High High
cufflinks 2.034        

0 Strain