Gene : Glyma.06G018500 G. max Wm82.a2.v1
Defline:  (1 of 16) PF05542 - Protein of unknown function (DUF760) (DUF760) Genomic Order:  185
Name:  ? Glyma.06G018500 Secondary Identifier:  ? PAC:30550061
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G018500 0.5kb upstream 0.5kb upstream 4384 true Chr06: 1396386-1400769 Glycine max
Glyma.06G018500 0.5kb upstream 0.5kb upstream 500 false Chr06: 1400270-1400769 Glycine max
Glyma.06G018500 0.5kb downstream 0.5kb downstream 4384 true Chr06: 1395886-1400269 Glycine max
Glyma.06G018500 0.5kb downstream 0.5kb downstream 500 false Chr06: 1395886-1396385 Glycine max
Glyma.06G018500 1.0kb upstream 1.0kb upstream 4884 true Chr06: 1396386-1401269 Glycine max
Glyma.06G018500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 1400270-1401269 Glycine max
Glyma.06G018500 1.0kb downstream 1.0kb downstream 4884 true Chr06: 1395386-1400269 Glycine max
Glyma.06G018500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 1395386-1396385 Glycine max
Glyma.06G018500 2.0kb upstream 2.0kb upstream 5884 true Chr06: 1396386-1402269 Glycine max
Glyma.06G018500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 1400270-1402269 Glycine max
Glyma.06G018500 2.0kb downstream 2.0kb downstream 5884 true Chr06: 1394386-1400269 Glycine max
Glyma.06G018500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 1394386-1396385 Glycine max
Glyma.06G018500 5.0kb upstream 5.0kb upstream 8884 true Chr06: 1396386-1405269 Glycine max
Glyma.06G018500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 1400270-1405269 Glycine max
Glyma.06G018500 5.0kb downstream 5.0kb downstream 8884 true Chr06: 1391386-1400269 Glycine max
Glyma.06G018500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 1391386-1396385 Glycine max
Glyma.06G018500 10.0kb upstream 10.0kb upstream 13884 true Chr06: 1396386-1410269 Glycine max
Glyma.06G018500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 1400270-1410269 Glycine max
Glyma.06G018500 10.0kb downstream 10.0kb downstream 13884 true Chr06: 1386386-1400269 Glycine max
Glyma.06G018500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 1386386-1396385 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301351 5265 Fabidae View MSA
124062669 5270 Rosid View MSA
123739576 5271 Pentapetalae View MSA
122788055 5272 Eudicot View MSA
122047250 5273 Angiosperm View MSA
121350732 5274 Embryophyte View MSA
123426159 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.373 0.0 49.1333   High
cufflinks 13.4228 0.0 36.3175    
cufflinks 6.18846 0.0 17.9676   Low
cufflinks 10.8535 0.0 29.7395    
cufflinks 8.46303 0.0 23.6821    
cufflinks 8.13421 0.0 22.8633    
cufflinks 13.119 0.0 35.5567    
cufflinks 7.94847 0.0 22.3834    
cufflinks 6.60973 0.0 19.0116   Low
cufflinks 3.932        
cufflinks 1.019       Low
cufflinks 3.679        
cufflinks 3.055        
cufflinks 3.057        
cufflinks 1.253       Low
cufflinks 6.386       High
cufflinks 1.623        
cufflinks 5.074        
cufflinks 6.723       High
cufflinks 6.326       High
cufflinks 1.0       Low
cufflinks 5.57        
cufflinks 6.604       High
cufflinks 1.608        
cufflinks 5.979        
cufflinks 1.271       Low

0 Strain