Gene : Glyma.06G020300 G. max Wm82.a2.v1
Defline:  (1 of 2) 4.1.1.17 - Ornithine decarboxylase / L-ornithine carboxy-lyase Genomic Order:  203
Name:  ? Glyma.06G020300 Secondary Identifier:  ? PAC:30552227
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax POLYAMINSYN3-PWY Glycine max pathologic  
Gmax PWY-46 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G020300 0.5kb upstream 0.5kb upstream 2085 true Chr06: 1539104-1541188 Glycine max
Glyma.06G020300 0.5kb upstream 0.5kb upstream 500 false Chr06: 1539104-1539603 Glycine max
Glyma.06G020300 0.5kb downstream 0.5kb downstream 2085 true Chr06: 1539604-1541688 Glycine max
Glyma.06G020300 0.5kb downstream 0.5kb downstream 500 false Chr06: 1541189-1541688 Glycine max
Glyma.06G020300 1.0kb upstream 1.0kb upstream 2585 true Chr06: 1538604-1541188 Glycine max
Glyma.06G020300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 1538604-1539603 Glycine max
Glyma.06G020300 1.0kb downstream 1.0kb downstream 2585 true Chr06: 1539604-1542188 Glycine max
Glyma.06G020300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 1541189-1542188 Glycine max
Glyma.06G020300 2.0kb upstream 2.0kb upstream 3585 true Chr06: 1537604-1541188 Glycine max
Glyma.06G020300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 1537604-1539603 Glycine max
Glyma.06G020300 2.0kb downstream 2.0kb downstream 3585 true Chr06: 1539604-1543188 Glycine max
Glyma.06G020300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 1541189-1543188 Glycine max
Glyma.06G020300 5.0kb upstream 5.0kb upstream 6585 true Chr06: 1534604-1541188 Glycine max
Glyma.06G020300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 1534604-1539603 Glycine max
Glyma.06G020300 5.0kb downstream 5.0kb downstream 6585 true Chr06: 1539604-1546188 Glycine max
Glyma.06G020300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 1541189-1546188 Glycine max
Glyma.06G020300 10.0kb upstream 10.0kb upstream 11585 true Chr06: 1529604-1541188 Glycine max
Glyma.06G020300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 1529604-1539603 Glycine max
Glyma.06G020300 10.0kb downstream 10.0kb downstream 11585 true Chr06: 1539604-1551188 Glycine max
Glyma.06G020300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 1541189-1551188 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301318 5265 Fabidae View MSA
124070276 5270 Rosid View MSA
123742733 5271 Pentapetalae View MSA
122796086 5272 Eudicot View MSA
122048449 5273 Angiosperm View MSA
121349416 5274 Embryophyte View MSA
123428095 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0075976 0.0 0.0365295 Low Low
cufflinks 355.653 0.0 1538.39 High High
cufflinks 92.1068 0.0 280.811 High  
cufflinks 0.524923 0.0 1.94097    
cufflinks 0.0826864 0.0 0.331123 Low  
cufflinks 18.5183 0.0 49.4127    
cufflinks 0.019     Low  
cufflinks 2.016        
cufflinks 0.011     Low Low
cufflinks 231.606     High High
cufflinks 393.464     High High
cufflinks 0.035     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.378        
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.762        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.047     Low  
cufflinks 0.071        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 6.217        

0 Strain