Gene : Glyma.06G020600 G. max Wm82.a2.v1

Defline:  (1 of 4) PTHR23504:SF36 - MAJOR FACILITATOR PROTEIN Genomic Order:  206
Name:  ? Glyma.06G020600 Secondary Identifier:  ? PAC:30552154

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G020600 0.5kb upstream 0.5kb upstream 9826 true Chr06: 1557807-1567632 Glycine max
Glyma.06G020600 0.5kb upstream 0.5kb upstream 500 false Chr06: 1567133-1567632 Glycine max
Glyma.06G020600 0.5kb downstream 0.5kb downstream 9826 true Chr06: 1557307-1567132 Glycine max
Glyma.06G020600 0.5kb downstream 0.5kb downstream 500 false Chr06: 1557307-1557806 Glycine max
Glyma.06G020600 1.0kb upstream 1.0kb upstream 10326 true Chr06: 1557807-1568132 Glycine max
Glyma.06G020600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 1567133-1568132 Glycine max
Glyma.06G020600 1.0kb downstream 1.0kb downstream 10326 true Chr06: 1556807-1567132 Glycine max
Glyma.06G020600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 1556807-1557806 Glycine max
Glyma.06G020600 2.0kb upstream 2.0kb upstream 11326 true Chr06: 1557807-1569132 Glycine max
Glyma.06G020600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 1567133-1569132 Glycine max
Glyma.06G020600 2.0kb downstream 2.0kb downstream 11326 true Chr06: 1555807-1567132 Glycine max
Glyma.06G020600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 1555807-1557806 Glycine max
Glyma.06G020600 5.0kb upstream 5.0kb upstream 14326 true Chr06: 1557807-1572132 Glycine max
Glyma.06G020600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 1567133-1572132 Glycine max
Glyma.06G020600 5.0kb downstream 5.0kb downstream 14326 true Chr06: 1552807-1567132 Glycine max
Glyma.06G020600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 1552807-1557806 Glycine max
Glyma.06G020600 10.0kb upstream 10.0kb upstream 19326 true Chr06: 1557807-1577132 Glycine max
Glyma.06G020600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 1567133-1577132 Glycine max
Glyma.06G020600 10.0kb downstream 10.0kb downstream 19326 true Chr06: 1547807-1567132 Glycine max
Glyma.06G020600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 1547807-1557806 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299862 5265 Fabidae View MSA
124071617 5270 Rosid View MSA
123753447 5271 Pentapetalae View MSA
122796821 5272 Eudicot View MSA
122045296 5273 Angiosperm View MSA
121351276 5274 Embryophyte View MSA
123428313 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.207276 0.0 0.80729 Low Low
cufflinks 0.5867 0.0 2.79845    
cufflinks 1.22524 0.0 7.1982    
cufflinks 6.64563 0.0 28.292   High
cufflinks 0.190962 0.0 1.38048 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.42895 0.0 11.5546    
cufflinks 4.48679 0.0 13.6278   High
cufflinks 0.402815 0.0 2.036    
cufflinks 0.55       High
cufflinks 0.002     Low Low
cufflinks 0.062     Low  
cufflinks 0.001     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.031     Low  
cufflinks 0.038     Low  
cufflinks 0.045     Low  
cufflinks 0.176        
cufflinks 0.049     Low  
cufflinks 0.002     Low Low
cufflinks 0.07     Low  
cufflinks 0.393       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.047     Low  
cufflinks 0.001     Low Low

0 Strain