Gene : Glyma.06G021200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13871//PTHR13871:SF48 - THIOREDOXIN Genomic Order:  212
Name:  ? Glyma.06G021200 Secondary Identifier:  ? PAC:30552484
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G021200 0.5kb upstream 0.5kb upstream 7866 true Chr06: 1600041-1607906 Glycine max
Glyma.06G021200 0.5kb upstream 0.5kb upstream 500 false Chr06: 1607407-1607906 Glycine max
Glyma.06G021200 0.5kb downstream 0.5kb downstream 7866 true Chr06: 1599541-1607406 Glycine max
Glyma.06G021200 0.5kb downstream 0.5kb downstream 500 false Chr06: 1599541-1600040 Glycine max
Glyma.06G021200 1.0kb upstream 1.0kb upstream 8366 true Chr06: 1600041-1608406 Glycine max
Glyma.06G021200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 1607407-1608406 Glycine max
Glyma.06G021200 1.0kb downstream 1.0kb downstream 8366 true Chr06: 1599041-1607406 Glycine max
Glyma.06G021200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 1599041-1600040 Glycine max
Glyma.06G021200 2.0kb upstream 2.0kb upstream 9366 true Chr06: 1600041-1609406 Glycine max
Glyma.06G021200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 1607407-1609406 Glycine max
Glyma.06G021200 2.0kb downstream 2.0kb downstream 9366 true Chr06: 1598041-1607406 Glycine max
Glyma.06G021200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 1598041-1600040 Glycine max
Glyma.06G021200 5.0kb upstream 5.0kb upstream 12366 true Chr06: 1600041-1612406 Glycine max
Glyma.06G021200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 1607407-1612406 Glycine max
Glyma.06G021200 5.0kb downstream 5.0kb downstream 12366 true Chr06: 1595041-1607406 Glycine max
Glyma.06G021200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 1595041-1600040 Glycine max
Glyma.06G021200 10.0kb upstream 10.0kb upstream 17366 true Chr06: 1600041-1617406 Glycine max
Glyma.06G021200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 1607407-1617406 Glycine max
Glyma.06G021200 10.0kb downstream 10.0kb downstream 17366 true Chr06: 1590041-1607406 Glycine max
Glyma.06G021200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 1590041-1600040 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300624 5265 Fabidae View MSA
124070669 5270 Rosid View MSA
123742683 5271 Pentapetalae View MSA
122794391 5272 Eudicot View MSA
122048350 5273 Angiosperm View MSA
123428873 5275 Viridiplantae View MSA
121310937 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.2645 0.0 58.8506    
cufflinks 9.07914 0.0 32.0136    
cufflinks 72.8731 0.0 286.206 High High
cufflinks 19.9178 0.0 68.2752 High  
cufflinks 12.4321 0.0 42.5656    
cufflinks 30.9793 0.0 111.874 High  
cufflinks 8.33001 0.0 29.9441    
cufflinks 9.92001 0.0 34.5912    
cufflinks 1.02991 0.0 5.63049   Low
cufflinks 0.638        
cufflinks 0.549        
cufflinks 9.567     High High
cufflinks 0.429        
cufflinks 0.557        
cufflinks 0.969        
cufflinks 1.003        
cufflinks 0.314        
cufflinks 4.013       High
cufflinks 1.314        
cufflinks 0.702        
cufflinks 0.419        
cufflinks 1.174        
cufflinks 1.301        
cufflinks 0.144       Low
cufflinks 0.754        
cufflinks 0.458        

0 Strain