Gene : Glyma.06G021700 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31867:SF4 - EXPANSIN-A11 Genomic Order:  217
Name:  ? Glyma.06G021700 Secondary Identifier:  ? PAC:30551286
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G021700 0.5kb upstream 0.5kb upstream 2488 true Chr06: 1635412-1637899 Glycine max
Glyma.06G021700 0.5kb upstream 0.5kb upstream 500 false Chr06: 1635412-1635911 Glycine max
Glyma.06G021700 0.5kb downstream 0.5kb downstream 2488 true Chr06: 1635912-1638399 Glycine max
Glyma.06G021700 0.5kb downstream 0.5kb downstream 500 false Chr06: 1637900-1638399 Glycine max
Glyma.06G021700 1.0kb upstream 1.0kb upstream 2988 true Chr06: 1634912-1637899 Glycine max
Glyma.06G021700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 1634912-1635911 Glycine max
Glyma.06G021700 1.0kb downstream 1.0kb downstream 2988 true Chr06: 1635912-1638899 Glycine max
Glyma.06G021700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 1637900-1638899 Glycine max
Glyma.06G021700 2.0kb upstream 2.0kb upstream 3988 true Chr06: 1633912-1637899 Glycine max
Glyma.06G021700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 1633912-1635911 Glycine max
Glyma.06G021700 2.0kb downstream 2.0kb downstream 3988 true Chr06: 1635912-1639899 Glycine max
Glyma.06G021700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 1637900-1639899 Glycine max
Glyma.06G021700 5.0kb upstream 5.0kb upstream 6988 true Chr06: 1630912-1637899 Glycine max
Glyma.06G021700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 1630912-1635911 Glycine max
Glyma.06G021700 5.0kb downstream 5.0kb downstream 6988 true Chr06: 1635912-1642899 Glycine max
Glyma.06G021700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 1637900-1642899 Glycine max
Glyma.06G021700 10.0kb upstream 10.0kb upstream 11988 true Chr06: 1625912-1637899 Glycine max
Glyma.06G021700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 1625912-1635911 Glycine max
Glyma.06G021700 10.0kb downstream 10.0kb downstream 11988 true Chr06: 1635912-1647899 Glycine max
Glyma.06G021700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 1637900-1647899 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253785 5265 Fabidae View MSA
124073729 5270 Rosid View MSA
123747449 5271 Pentapetalae View MSA
122792486 5272 Eudicot View MSA
122042176 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121348621 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0734454 0.0 0.299641 Low  
cufflinks 0.495078 0.0 1.86515    
cufflinks 0.0100507 0.0 0.0483242 Low Low
cufflinks 9.26138 0.0 26.1739   High
cufflinks 1.90406 0.0 6.59328    
cufflinks 0.256883 0.0 0.996494    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.04141 0.0 7.03315    
cufflinks 0.022     Low Low
cufflinks 0.046     Low  
cufflinks 0.971        
cufflinks 5.969       High
cufflinks 12.967     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.162        
cufflinks 0.289        
cufflinks 7.698     High High
cufflinks 0.315        
cufflinks 0.159        
cufflinks 0.136        
cufflinks 0.076     Low  
cufflinks 0.253        
cufflinks 0.01     Low Low
cufflinks 0.188        
cufflinks 0.352        

0 Strain