Gene : Glyma.06G066000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR12294//PTHR12294:SF12 - EF HAND DOMAIN FAMILY A1,A2-RELATED Genomic Order:  660
Name:  ? Glyma.06G066000 Secondary Identifier:  ? PAC:30551321
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G066000 0.5kb upstream 0.5kb upstream 4771 true Chr06: 5039576-5044346 Glycine max
Glyma.06G066000 0.5kb upstream 0.5kb upstream 500 false Chr06: 5039576-5040075 Glycine max
Glyma.06G066000 0.5kb downstream 0.5kb downstream 4771 true Chr06: 5040076-5044846 Glycine max
Glyma.06G066000 0.5kb downstream 0.5kb downstream 500 false Chr06: 5044347-5044846 Glycine max
Glyma.06G066000 1.0kb upstream 1.0kb upstream 5271 true Chr06: 5039076-5044346 Glycine max
Glyma.06G066000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 5039076-5040075 Glycine max
Glyma.06G066000 1.0kb downstream 1.0kb downstream 5271 true Chr06: 5040076-5045346 Glycine max
Glyma.06G066000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 5044347-5045346 Glycine max
Glyma.06G066000 2.0kb upstream 2.0kb upstream 6271 true Chr06: 5038076-5044346 Glycine max
Glyma.06G066000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 5038076-5040075 Glycine max
Glyma.06G066000 2.0kb downstream 2.0kb downstream 6271 true Chr06: 5040076-5046346 Glycine max
Glyma.06G066000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 5044347-5046346 Glycine max
Glyma.06G066000 5.0kb upstream 5.0kb upstream 9271 true Chr06: 5035076-5044346 Glycine max
Glyma.06G066000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 5035076-5040075 Glycine max
Glyma.06G066000 5.0kb downstream 5.0kb downstream 9271 true Chr06: 5040076-5049346 Glycine max
Glyma.06G066000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 5044347-5049346 Glycine max
Glyma.06G066000 10.0kb upstream 10.0kb upstream 14271 true Chr06: 5030076-5044346 Glycine max
Glyma.06G066000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 5030076-5040075 Glycine max
Glyma.06G066000 10.0kb downstream 10.0kb downstream 14271 true Chr06: 5040076-5054346 Glycine max
Glyma.06G066000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 5044347-5054346 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297525 5265 Fabidae View MSA
124036056 5270 Rosid View MSA
123742641 5271 Pentapetalae View MSA
122790177 5272 Eudicot View MSA
122041646 5273 Angiosperm View MSA
121347886 5274 Embryophyte View MSA
123424828 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.106734 0.0 0.422818 Low Low
cufflinks 0.503835 0.0 1.86882    
cufflinks 0.21825 0.0 0.840618    
cufflinks 0.728808 0.0 2.64817   High
cufflinks 0.306859 0.0 1.16496    
cufflinks 0.123346 0.0 0.485994 Low Low
cufflinks 0.643438 0.0 2.35874    
cufflinks 0.537252 0.0 1.98552    
cufflinks 0.409337 0.0 1.53313    
cufflinks 0.269       High
cufflinks 0.223        
cufflinks 0.113     Low Low
cufflinks 0.272       High
cufflinks 0.165        
cufflinks 0.08       Low
cufflinks 0.19        
cufflinks 0.182        
cufflinks 0.212        
cufflinks 0.13       Low
cufflinks 0.234        
cufflinks 0.232        
cufflinks 0.241        
cufflinks 0.19        
cufflinks 0.128       Low
cufflinks 0.185        
cufflinks 0.2        

0 Strain