Gene : Glyma.06G069400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22595//PTHR22595:SF56 - CHITINASE-RELATED Genomic Order:  694
Name:  ? Glyma.06G069400 Secondary Identifier:  ? PAC:30550906
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G069400 0.5kb upstream 0.5kb upstream 1250 true Chr06: 5325032-5326281 Glycine max
Glyma.06G069400 0.5kb upstream 0.5kb upstream 500 false Chr06: 5325782-5326281 Glycine max
Glyma.06G069400 0.5kb downstream 0.5kb downstream 1250 true Chr06: 5324532-5325781 Glycine max
Glyma.06G069400 0.5kb downstream 0.5kb downstream 500 false Chr06: 5324532-5325031 Glycine max
Glyma.06G069400 1.0kb upstream 1.0kb upstream 1750 true Chr06: 5325032-5326781 Glycine max
Glyma.06G069400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 5325782-5326781 Glycine max
Glyma.06G069400 1.0kb downstream 1.0kb downstream 1750 true Chr06: 5324032-5325781 Glycine max
Glyma.06G069400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 5324032-5325031 Glycine max
Glyma.06G069400 2.0kb upstream 2.0kb upstream 2750 true Chr06: 5325032-5327781 Glycine max
Glyma.06G069400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 5325782-5327781 Glycine max
Glyma.06G069400 2.0kb downstream 2.0kb downstream 2750 true Chr06: 5323032-5325781 Glycine max
Glyma.06G069400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 5323032-5325031 Glycine max
Glyma.06G069400 5.0kb upstream 5.0kb upstream 5750 true Chr06: 5325032-5330781 Glycine max
Glyma.06G069400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 5325782-5330781 Glycine max
Glyma.06G069400 5.0kb downstream 5.0kb downstream 5750 true Chr06: 5320032-5325781 Glycine max
Glyma.06G069400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 5320032-5325031 Glycine max
Glyma.06G069400 10.0kb upstream 10.0kb upstream 10750 true Chr06: 5325032-5335781 Glycine max
Glyma.06G069400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 5325782-5335781 Glycine max
Glyma.06G069400 10.0kb downstream 10.0kb downstream 10750 true Chr06: 5315032-5325781 Glycine max
Glyma.06G069400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 5315032-5325031 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301004 5265 Fabidae View MSA
124072622 5270 Rosid View MSA
123752466 5271 Pentapetalae View MSA
122795564 5272 Eudicot View MSA
122051117 5273 Angiosperm View MSA
121350536 5274 Embryophyte View MSA
123381778 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.306868 0.0 1.27017    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.121088 0.0 0.535974 Low  
cufflinks 0.904942 0.0 3.5664    
cufflinks 0.0797604 0.0 0.366433 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.52012 0.0 9.50986   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.294679 0.0 1.2198    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 12.29     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low Low
cufflinks 0.049     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.132        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 10.387     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 22.478     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.75        

0 Strain