Gene : Glyma.06G059600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31319:SF4 - ZINC FINGER PROTEIN CONSTANS-LIKE 3-RELATED Genomic Order:  596
Name:  ? Glyma.06G059600 Secondary Identifier:  ? PAC:30549608
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G059600 0.5kb upstream 0.5kb upstream 1968 true Chr06: 4519232-4521199 Glycine max
Glyma.06G059600 0.5kb upstream 0.5kb upstream 500 false Chr06: 4519232-4519731 Glycine max
Glyma.06G059600 0.5kb downstream 0.5kb downstream 1968 true Chr06: 4519732-4521699 Glycine max
Glyma.06G059600 0.5kb downstream 0.5kb downstream 500 false Chr06: 4521200-4521699 Glycine max
Glyma.06G059600 1.0kb upstream 1.0kb upstream 2468 true Chr06: 4518732-4521199 Glycine max
Glyma.06G059600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 4518732-4519731 Glycine max
Glyma.06G059600 1.0kb downstream 1.0kb downstream 2468 true Chr06: 4519732-4522199 Glycine max
Glyma.06G059600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 4521200-4522199 Glycine max
Glyma.06G059600 2.0kb upstream 2.0kb upstream 3468 true Chr06: 4517732-4521199 Glycine max
Glyma.06G059600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 4517732-4519731 Glycine max
Glyma.06G059600 2.0kb downstream 2.0kb downstream 3468 true Chr06: 4519732-4523199 Glycine max
Glyma.06G059600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 4521200-4523199 Glycine max
Glyma.06G059600 5.0kb upstream 5.0kb upstream 6468 true Chr06: 4514732-4521199 Glycine max
Glyma.06G059600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 4514732-4519731 Glycine max
Glyma.06G059600 5.0kb downstream 5.0kb downstream 6468 true Chr06: 4519732-4526199 Glycine max
Glyma.06G059600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 4521200-4526199 Glycine max
Glyma.06G059600 10.0kb upstream 10.0kb upstream 11468 true Chr06: 4509732-4521199 Glycine max
Glyma.06G059600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 4509732-4519731 Glycine max
Glyma.06G059600 10.0kb downstream 10.0kb downstream 11468 true Chr06: 4519732-4531199 Glycine max
Glyma.06G059600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 4521200-4531199 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315046 5265 Fabidae View MSA
124065219 5270 Rosid View MSA
123752107 5271 Pentapetalae View MSA
122792098 5272 Eudicot View MSA
122049836 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121345556 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 124.895 0.0 387.592 High High
cufflinks 91.8408 0.0 269.464 High  
cufflinks 111.232 0.0 331.984 High  
cufflinks 79.8534 0.0 229.687 High  
cufflinks 32.8514 0.0 88.3644 High  
cufflinks 26.259 0.0 70.1046 High Low
cufflinks 72.6593 0.0 207.94 High  
cufflinks 86.7466 0.0 252.786 High  
cufflinks 19.8849 0.0 53.1273 High Low
cufflinks 35.331     High  
cufflinks 35.549     High  
cufflinks 49.182     High  
cufflinks 8.425     High Low
cufflinks 9.658     High Low
cufflinks 20.244     High  
cufflinks 107.146     High High
cufflinks 5.038       Low
cufflinks 30.371     High  
cufflinks 59.881     High  
cufflinks 124.843     High High
cufflinks 24.547     High  
cufflinks 94.626     High High
cufflinks 46.782     High  
cufflinks 20.073     High  
cufflinks 123.628     High High
cufflinks 10.636     High Low

0 Strain