Gene : Glyma.06G060000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12136//PTHR12136:SF38 - STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR Genomic Order:  600
Name:  ? Glyma.06G060000 Secondary Identifier:  ? PAC:30553877
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G060000 0.5kb upstream 0.5kb upstream 2125 true Chr06: 4552686-4554810 Glycine max
Glyma.06G060000 0.5kb upstream 0.5kb upstream 500 false Chr06: 4552686-4553185 Glycine max
Glyma.06G060000 0.5kb downstream 0.5kb downstream 2125 true Chr06: 4553186-4555310 Glycine max
Glyma.06G060000 0.5kb downstream 0.5kb downstream 500 false Chr06: 4554811-4555310 Glycine max
Glyma.06G060000 1.0kb upstream 1.0kb upstream 2625 true Chr06: 4552186-4554810 Glycine max
Glyma.06G060000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 4552186-4553185 Glycine max
Glyma.06G060000 1.0kb downstream 1.0kb downstream 2625 true Chr06: 4553186-4555810 Glycine max
Glyma.06G060000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 4554811-4555810 Glycine max
Glyma.06G060000 2.0kb upstream 2.0kb upstream 3625 true Chr06: 4551186-4554810 Glycine max
Glyma.06G060000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 4551186-4553185 Glycine max
Glyma.06G060000 2.0kb downstream 2.0kb downstream 3625 true Chr06: 4553186-4556810 Glycine max
Glyma.06G060000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 4554811-4556810 Glycine max
Glyma.06G060000 5.0kb upstream 5.0kb upstream 6625 true Chr06: 4548186-4554810 Glycine max
Glyma.06G060000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 4548186-4553185 Glycine max
Glyma.06G060000 5.0kb downstream 5.0kb downstream 6625 true Chr06: 4553186-4559810 Glycine max
Glyma.06G060000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 4554811-4559810 Glycine max
Glyma.06G060000 10.0kb upstream 10.0kb upstream 11625 true Chr06: 4543186-4554810 Glycine max
Glyma.06G060000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 4543186-4553185 Glycine max
Glyma.06G060000 10.0kb downstream 10.0kb downstream 11625 true Chr06: 4553186-4564810 Glycine max
Glyma.06G060000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 4554811-4564810 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301077 5265 Fabidae View MSA
124064079 5270 Rosid View MSA
123745127 5271 Pentapetalae View MSA
122790328 5272 Eudicot View MSA
122048003 5273 Angiosperm View MSA
121346001 5274 Embryophyte View MSA
123380307 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.18655 0.0 12.8321    
cufflinks 5.42449 0.0 16.116    
cufflinks 4.15068 0.0 12.8999    
cufflinks 2.93004 0.0 9.47544   Low
cufflinks 7.49285 0.0 21.134   High
cufflinks 7.73974 0.0 21.8615   High
cufflinks 4.90309 0.0 14.6238    
cufflinks 2.9728 0.0 9.60237   Low
cufflinks 6.64316 0.0 19.1246    
cufflinks 10.649     High High
cufflinks 5.342        
cufflinks 6.187        
cufflinks 4.356        
cufflinks 3.814        
cufflinks 1.942       Low
cufflinks 4.898        
cufflinks 25.304     High High
cufflinks 7.751     High  
cufflinks 3.914        
cufflinks 3.921        
cufflinks 3.836        
cufflinks 3.868        
cufflinks 6.106        
cufflinks 3.688        
cufflinks 3.308        
cufflinks 5.621        

0 Strain