Gene : Glyma.06G060100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31235:SF9 - PEROXIDASE 18-RELATED Genomic Order:  601
Name:  ? Glyma.06G060100 Secondary Identifier:  ? PAC:30552014
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5466 Glycine max pathologic  
Gmax PWY-6824 Glycine max pathologic  
Gmax PWY-7214 Glycine max pathologic  
Gmax PWY-7445 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G060100 0.5kb upstream 0.5kb upstream 2910 true Chr06: 4557987-4560896 Glycine max
Glyma.06G060100 0.5kb upstream 0.5kb upstream 500 false Chr06: 4560397-4560896 Glycine max
Glyma.06G060100 0.5kb downstream 0.5kb downstream 2910 true Chr06: 4557487-4560396 Glycine max
Glyma.06G060100 0.5kb downstream 0.5kb downstream 500 false Chr06: 4557487-4557986 Glycine max
Glyma.06G060100 1.0kb upstream 1.0kb upstream 3410 true Chr06: 4557987-4561396 Glycine max
Glyma.06G060100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 4560397-4561396 Glycine max
Glyma.06G060100 1.0kb downstream 1.0kb downstream 3410 true Chr06: 4556987-4560396 Glycine max
Glyma.06G060100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 4556987-4557986 Glycine max
Glyma.06G060100 2.0kb upstream 2.0kb upstream 4410 true Chr06: 4557987-4562396 Glycine max
Glyma.06G060100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 4560397-4562396 Glycine max
Glyma.06G060100 2.0kb downstream 2.0kb downstream 4410 true Chr06: 4555987-4560396 Glycine max
Glyma.06G060100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 4555987-4557986 Glycine max
Glyma.06G060100 5.0kb upstream 5.0kb upstream 7410 true Chr06: 4557987-4565396 Glycine max
Glyma.06G060100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 4560397-4565396 Glycine max
Glyma.06G060100 5.0kb downstream 5.0kb downstream 7410 true Chr06: 4552987-4560396 Glycine max
Glyma.06G060100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 4552987-4557986 Glycine max
Glyma.06G060100 10.0kb upstream 10.0kb upstream 12410 true Chr06: 4557987-4570396 Glycine max
Glyma.06G060100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 4560397-4570396 Glycine max
Glyma.06G060100 10.0kb downstream 10.0kb downstream 12410 true Chr06: 4547987-4560396 Glycine max
Glyma.06G060100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 4547987-4557986 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040962 5273 Angiosperm View MSA
122309161 5265 Fabidae View MSA
124067094 5270 Rosid View MSA
123737779 5271 Pentapetalae View MSA
122790271 5272 Eudicot View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 9.39481 0.0 26.5908   High
cufflinks 2.3526 0.0 7.95893    
cufflinks 0.990681 0.0 3.60851    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.50541 0.0 5.33978    
cufflinks 4.02502 0.0 12.8212    
cufflinks 0.167186 0.0 0.659721 Low Low
cufflinks 0.0763918 0.0 0.311223 Low Low
cufflinks 0.006     Low Low
cufflinks 0.017     Low  
cufflinks 2.178       High
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.279        
cufflinks 0.018     Low  
cufflinks 0.526        
cufflinks 7.253       High
cufflinks 0.153        
cufflinks 0.01     Low Low
cufflinks 0.208        
cufflinks 0.827        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.252        
cufflinks 0.016     Low  

0 Strain