Gene : Glyma.06G062800 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR12663:SF3 - ASPARTYL BETA-HYDROXYLASE N-TERMINAL REGION DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  628
Name:  ? Glyma.06G062800 Secondary Identifier:  ? PAC:30551079
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G062800 0.5kb upstream 0.5kb upstream 8876 true Chr06: 4751189-4760064 Glycine max
Glyma.06G062800 0.5kb upstream 0.5kb upstream 500 false Chr06: 4759565-4760064 Glycine max
Glyma.06G062800 0.5kb downstream 0.5kb downstream 8876 true Chr06: 4750689-4759564 Glycine max
Glyma.06G062800 0.5kb downstream 0.5kb downstream 500 false Chr06: 4750689-4751188 Glycine max
Glyma.06G062800 1.0kb upstream 1.0kb upstream 9376 true Chr06: 4751189-4760564 Glycine max
Glyma.06G062800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 4759565-4760564 Glycine max
Glyma.06G062800 1.0kb downstream 1.0kb downstream 9376 true Chr06: 4750189-4759564 Glycine max
Glyma.06G062800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 4750189-4751188 Glycine max
Glyma.06G062800 2.0kb upstream 2.0kb upstream 10376 true Chr06: 4751189-4761564 Glycine max
Glyma.06G062800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 4759565-4761564 Glycine max
Glyma.06G062800 2.0kb downstream 2.0kb downstream 10376 true Chr06: 4749189-4759564 Glycine max
Glyma.06G062800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 4749189-4751188 Glycine max
Glyma.06G062800 5.0kb upstream 5.0kb upstream 13376 true Chr06: 4751189-4764564 Glycine max
Glyma.06G062800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 4759565-4764564 Glycine max
Glyma.06G062800 5.0kb downstream 5.0kb downstream 13376 true Chr06: 4746189-4759564 Glycine max
Glyma.06G062800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 4746189-4751188 Glycine max
Glyma.06G062800 10.0kb upstream 10.0kb upstream 18376 true Chr06: 4751189-4769564 Glycine max
Glyma.06G062800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 4759565-4769564 Glycine max
Glyma.06G062800 10.0kb downstream 10.0kb downstream 18376 true Chr06: 4741189-4759564 Glycine max
Glyma.06G062800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 4741189-4751188 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302451 5265 Fabidae View MSA
124073544 5270 Rosid View MSA
123751665 5271 Pentapetalae View MSA
122793321 5272 Eudicot View MSA
122042349 5273 Angiosperm View MSA
121309949 5274 Embryophyte View MSA
123426721 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.3027 0.0 38.0083    
cufflinks 15.9493 0.0 52.1255   High
cufflinks 14.2037 0.0 45.569   High
cufflinks 11.3537 0.0 35.4264    
cufflinks 8.90831 0.0 27.211   Low
cufflinks 8.77231 0.0 26.2105   Low
cufflinks 9.67566 0.0 29.4966    
cufflinks 9.39164 0.0 29.12    
cufflinks 11.1492 0.0 34.6249    
cufflinks 2.391       Low
cufflinks 2.812        
cufflinks 4.729       High
cufflinks 3.036        
cufflinks 3.444        
cufflinks 2.918        
cufflinks 3.987        
cufflinks 1.734       Low
cufflinks 4.689       High
cufflinks 4.318        
cufflinks 4.512       High
cufflinks 2.393       Low
cufflinks 4.378        
cufflinks 3.72        
cufflinks 3.161        
cufflinks 3.823        
cufflinks 2.46       Low

0 Strain