Gene : Glyma.06G052800 G. max Wm82.a2.v1
Defline:  (1 of 12) PTHR13140:SF84 - MYOSIN VIII Genomic Order:  528
Name:  ? Glyma.06G052800 Secondary Identifier:  ? PAC:30550071
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G052800 0.5kb upstream 0.5kb upstream 3030 true Chr06: 3991249-3994278 Glycine max
Glyma.06G052800 0.5kb upstream 0.5kb upstream 500 false Chr06: 3993779-3994278 Glycine max
Glyma.06G052800 0.5kb downstream 0.5kb downstream 3030 true Chr06: 3990749-3993778 Glycine max
Glyma.06G052800 0.5kb downstream 0.5kb downstream 500 false Chr06: 3990749-3991248 Glycine max
Glyma.06G052800 1.0kb upstream 1.0kb upstream 3530 true Chr06: 3991249-3994778 Glycine max
Glyma.06G052800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3993779-3994778 Glycine max
Glyma.06G052800 1.0kb downstream 1.0kb downstream 3530 true Chr06: 3990249-3993778 Glycine max
Glyma.06G052800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3990249-3991248 Glycine max
Glyma.06G052800 2.0kb upstream 2.0kb upstream 4530 true Chr06: 3991249-3995778 Glycine max
Glyma.06G052800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3993779-3995778 Glycine max
Glyma.06G052800 2.0kb downstream 2.0kb downstream 4530 true Chr06: 3989249-3993778 Glycine max
Glyma.06G052800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3989249-3991248 Glycine max
Glyma.06G052800 5.0kb upstream 5.0kb upstream 7530 true Chr06: 3991249-3998778 Glycine max
Glyma.06G052800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3993779-3998778 Glycine max
Glyma.06G052800 5.0kb downstream 5.0kb downstream 7530 true Chr06: 3986249-3993778 Glycine max
Glyma.06G052800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3986249-3991248 Glycine max
Glyma.06G052800 10.0kb upstream 10.0kb upstream 12530 true Chr06: 3991249-4003778 Glycine max
Glyma.06G052800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3993779-4003778 Glycine max
Glyma.06G052800 10.0kb downstream 10.0kb downstream 12530 true Chr06: 3981249-3993778 Glycine max
Glyma.06G052800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3981249-3991248 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041133 5273 Angiosperm View MSA
122306621 5265 Fabidae View MSA
124066081 5270 Rosid View MSA
123748663 5271 Pentapetalae View MSA
122789364 5272 Eudicot View MSA
121351537 5274 Embryophyte View MSA
123382213 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0370188 0.0 0.183287 Low Low
cufflinks 18.8664 0.0 57.0524    
cufflinks 0.547525 0.0 2.14011    
cufflinks 2.95487 0.0 8.93565    
cufflinks 3.28328 0.0 10.1841    
cufflinks 62.1447 0.0 198.653 High High
cufflinks 4.55206 0.0 15.4096    
cufflinks 1.39509 0.0 5.06604    
cufflinks 6.22457 0.0 19.3288    
cufflinks 2.075        
cufflinks 0.455       Low
cufflinks 2.292        
cufflinks 5.669        
cufflinks 3.612        
cufflinks 0.449       Low
cufflinks 8.148     High  
cufflinks 0.264       Low
cufflinks 1.509        
cufflinks 28.751     High High
cufflinks 5.745        
cufflinks 0.244       Low
cufflinks 8.057     High  
cufflinks 13.985     High High
cufflinks 0.41       Low
cufflinks 5.726        
cufflinks 0.583        

0 Strain