Gene : Glyma.06G053100 G. max Wm82.a2.v1
Defline:  (1 of 18) KOG2922 - Uncharacterized conserved protein Genomic Order:  531
Name:  ? Glyma.06G053100 Secondary Identifier:  ? PAC:30550354
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G053100 0.5kb upstream 0.5kb upstream 5139 true Chr06: 4017860-4022998 Glycine max
Glyma.06G053100 0.5kb upstream 0.5kb upstream 500 false Chr06: 4022499-4022998 Glycine max
Glyma.06G053100 0.5kb downstream 0.5kb downstream 5139 true Chr06: 4017360-4022498 Glycine max
Glyma.06G053100 0.5kb downstream 0.5kb downstream 500 false Chr06: 4017360-4017859 Glycine max
Glyma.06G053100 1.0kb upstream 1.0kb upstream 5639 true Chr06: 4017860-4023498 Glycine max
Glyma.06G053100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 4022499-4023498 Glycine max
Glyma.06G053100 1.0kb downstream 1.0kb downstream 5639 true Chr06: 4016860-4022498 Glycine max
Glyma.06G053100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 4016860-4017859 Glycine max
Glyma.06G053100 2.0kb upstream 2.0kb upstream 6639 true Chr06: 4017860-4024498 Glycine max
Glyma.06G053100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 4022499-4024498 Glycine max
Glyma.06G053100 2.0kb downstream 2.0kb downstream 6639 true Chr06: 4015860-4022498 Glycine max
Glyma.06G053100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 4015860-4017859 Glycine max
Glyma.06G053100 5.0kb upstream 5.0kb upstream 9639 true Chr06: 4017860-4027498 Glycine max
Glyma.06G053100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 4022499-4027498 Glycine max
Glyma.06G053100 5.0kb downstream 5.0kb downstream 9639 true Chr06: 4012860-4022498 Glycine max
Glyma.06G053100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 4012860-4017859 Glycine max
Glyma.06G053100 10.0kb upstream 10.0kb upstream 14639 true Chr06: 4017860-4032498 Glycine max
Glyma.06G053100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 4022499-4032498 Glycine max
Glyma.06G053100 10.0kb downstream 10.0kb downstream 14639 true Chr06: 4007860-4022498 Glycine max
Glyma.06G053100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 4007860-4017859 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311848 5265 Fabidae View MSA
124065419 5270 Rosid View MSA
123737318 5271 Pentapetalae View MSA
122791606 5272 Eudicot View MSA
122046404 5273 Angiosperm View MSA
121346413 5274 Embryophyte View MSA
123423946 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.5364 0.0 21.1093    
cufflinks 4.68187 0.0 13.8721    
cufflinks 9.66097 0.0 26.4111   High
cufflinks 4.62962 0.0 13.722    
cufflinks 5.64908 0.0 16.3355    
cufflinks 8.35612 0.0 23.138   High
cufflinks 5.44645 0.0 15.8335    
cufflinks 4.63182 0.0 13.7282    
cufflinks 4.40928 0.0 13.1559    
cufflinks 1.864        
cufflinks 7.196     High High
cufflinks 1.932        
cufflinks 1.691        
cufflinks 1.613        
cufflinks 4.031        
cufflinks 2.209        
cufflinks 4.782        
cufflinks 1.747        
cufflinks 2.088        
cufflinks 2.522        
cufflinks 9.532     High High
cufflinks 2.358        
cufflinks 1.727        
cufflinks 8.217     High High
cufflinks 2.235        
cufflinks 6.914     High High

0 Strain