Gene : Glyma.06G055500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR34455:SF1 - EXPRESSED PROTEIN Genomic Order:  555
Name:  ? Glyma.06G055500 Secondary Identifier:  ? PAC:30551284
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G055500 0.5kb upstream 0.5kb upstream 1409 true Chr06: 4197245-4198653 Glycine max
Glyma.06G055500 0.5kb upstream 0.5kb upstream 500 false Chr06: 4197245-4197744 Glycine max
Glyma.06G055500 0.5kb downstream 0.5kb downstream 1409 true Chr06: 4197745-4199153 Glycine max
Glyma.06G055500 0.5kb downstream 0.5kb downstream 500 false Chr06: 4198654-4199153 Glycine max
Glyma.06G055500 1.0kb upstream 1.0kb upstream 1909 true Chr06: 4196745-4198653 Glycine max
Glyma.06G055500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 4196745-4197744 Glycine max
Glyma.06G055500 1.0kb downstream 1.0kb downstream 1909 true Chr06: 4197745-4199653 Glycine max
Glyma.06G055500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 4198654-4199653 Glycine max
Glyma.06G055500 2.0kb upstream 2.0kb upstream 2909 true Chr06: 4195745-4198653 Glycine max
Glyma.06G055500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 4195745-4197744 Glycine max
Glyma.06G055500 2.0kb downstream 2.0kb downstream 2909 true Chr06: 4197745-4200653 Glycine max
Glyma.06G055500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 4198654-4200653 Glycine max
Glyma.06G055500 5.0kb upstream 5.0kb upstream 5909 true Chr06: 4192745-4198653 Glycine max
Glyma.06G055500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 4192745-4197744 Glycine max
Glyma.06G055500 5.0kb downstream 5.0kb downstream 5909 true Chr06: 4197745-4203653 Glycine max
Glyma.06G055500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 4198654-4203653 Glycine max
Glyma.06G055500 10.0kb upstream 10.0kb upstream 10909 true Chr06: 4187745-4198653 Glycine max
Glyma.06G055500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 4187745-4197744 Glycine max
Glyma.06G055500 10.0kb downstream 10.0kb downstream 10909 true Chr06: 4197745-4208653 Glycine max
Glyma.06G055500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 4198654-4208653 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311753 5265 Fabidae View MSA
124072175 5270 Rosid View MSA
123739685 5271 Pentapetalae View MSA
122793757 5272 Eudicot View MSA
122041544 5273 Angiosperm View MSA
121346235 5274 Embryophyte View MSA
123428099 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 273.1 0.0 882.789 High  
cufflinks 338.669 0.0 1152.17 High  
cufflinks 180.18 0.0 544.699 High  
cufflinks 124.324 0.0 355.859 High  
cufflinks 38.0841 0.0 101.633 High Low
cufflinks 35.1407 0.0 93.8553 High Low
cufflinks 441.992 0.0 1604.6 High High
cufflinks 194.239 0.0 594.475 High  
cufflinks 25.46 0.0 68.6356 High Low
cufflinks 198.475     High  
cufflinks 6.656     High  
cufflinks 123.776     High  
cufflinks 3.263       Low
cufflinks 2.486       Low
cufflinks 5.334     High  
cufflinks 407.122     High High
cufflinks 2.0       Low
cufflinks 94.839     High  
cufflinks 214.495     High  
cufflinks 473.136     High High
cufflinks 4.881        
cufflinks 418.359     High High
cufflinks 379.837     High High
cufflinks 4.344        
cufflinks 470.564     High High
cufflinks 2.123       Low

0 Strain