Gene : Glyma.06G055800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24006:SF502 - F-BOX/LRR-REPEAT PROTEIN 15-RELATED Genomic Order:  558
Name:  ? Glyma.06G055800 Secondary Identifier:  ? PAC:30551944
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G055800 0.5kb upstream 0.5kb upstream 6481 true Chr06: 4217356-4223836 Glycine max
Glyma.06G055800 0.5kb upstream 0.5kb upstream 500 false Chr06: 4217356-4217855 Glycine max
Glyma.06G055800 0.5kb downstream 0.5kb downstream 6481 true Chr06: 4217856-4224336 Glycine max
Glyma.06G055800 0.5kb downstream 0.5kb downstream 500 false Chr06: 4223837-4224336 Glycine max
Glyma.06G055800 1.0kb upstream 1.0kb upstream 6981 true Chr06: 4216856-4223836 Glycine max
Glyma.06G055800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 4216856-4217855 Glycine max
Glyma.06G055800 1.0kb downstream 1.0kb downstream 6981 true Chr06: 4217856-4224836 Glycine max
Glyma.06G055800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 4223837-4224836 Glycine max
Glyma.06G055800 2.0kb upstream 2.0kb upstream 7981 true Chr06: 4215856-4223836 Glycine max
Glyma.06G055800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 4215856-4217855 Glycine max
Glyma.06G055800 2.0kb downstream 2.0kb downstream 7981 true Chr06: 4217856-4225836 Glycine max
Glyma.06G055800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 4223837-4225836 Glycine max
Glyma.06G055800 5.0kb upstream 5.0kb upstream 10981 true Chr06: 4212856-4223836 Glycine max
Glyma.06G055800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 4212856-4217855 Glycine max
Glyma.06G055800 5.0kb downstream 5.0kb downstream 10981 true Chr06: 4217856-4228836 Glycine max
Glyma.06G055800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 4223837-4228836 Glycine max
Glyma.06G055800 10.0kb upstream 10.0kb upstream 15981 true Chr06: 4207856-4223836 Glycine max
Glyma.06G055800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 4207856-4217855 Glycine max
Glyma.06G055800 10.0kb downstream 10.0kb downstream 15981 true Chr06: 4217856-4233836 Glycine max
Glyma.06G055800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 4223837-4233836 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253704 5265 Fabidae View MSA
124065203 5270 Rosid View MSA
123738789 5271 Pentapetalae View MSA
122785626 5272 Eudicot View MSA
122046076 5273 Angiosperm View MSA
123428966 5275 Viridiplantae View MSA
121348124 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.70735 0.0 20.6625   Low
cufflinks 12.6314 0.0 33.7768    
cufflinks 15.0495 0.0 40.4808   High
cufflinks 14.5141 0.0 38.953    
cufflinks 9.65285 0.0 25.7608    
cufflinks 7.57897 0.0 20.3164   Low
cufflinks 15.7001 0.0 42.2218   High
cufflinks 9.25074 0.0 24.6929    
cufflinks 11.1505 0.0 29.7605    
cufflinks 4.399       Low
cufflinks 3.737       Low
cufflinks 9.045     High High
cufflinks 6.413        
cufflinks 6.428        
cufflinks 4.855        
cufflinks 7.545     High  
cufflinks 4.32       Low
cufflinks 10.361     High High
cufflinks 9.022     High High
cufflinks 8.176     High  
cufflinks 4.001       Low
cufflinks 7.714     High  
cufflinks 7.668     High  
cufflinks 4.015       Low
cufflinks 7.562     High  
cufflinks 5.222        

0 Strain