Gene : Glyma.06G056300 G. max Wm82.a2.v1
Defline:  (1 of 10) PF00122//PF00403//PF12710 - E1-E2 ATPase (E1-E2_ATPase) // Heavy-metal-associated domain (HMA) // haloacid dehalogenase-like hydrolase (HAD) Genomic Order:  563
Name:  ? Glyma.06G056300 Secondary Identifier:  ? PAC:30551353
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G056300 0.5kb upstream 0.5kb upstream 9318 true Chr06: 4240410-4249727 Glycine max
Glyma.06G056300 0.5kb upstream 0.5kb upstream 500 false Chr06: 4240410-4240909 Glycine max
Glyma.06G056300 0.5kb downstream 0.5kb downstream 9318 true Chr06: 4240910-4250227 Glycine max
Glyma.06G056300 0.5kb downstream 0.5kb downstream 500 false Chr06: 4249728-4250227 Glycine max
Glyma.06G056300 1.0kb upstream 1.0kb upstream 9818 true Chr06: 4239910-4249727 Glycine max
Glyma.06G056300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 4239910-4240909 Glycine max
Glyma.06G056300 1.0kb downstream 1.0kb downstream 9818 true Chr06: 4240910-4250727 Glycine max
Glyma.06G056300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 4249728-4250727 Glycine max
Glyma.06G056300 2.0kb upstream 2.0kb upstream 10818 true Chr06: 4238910-4249727 Glycine max
Glyma.06G056300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 4238910-4240909 Glycine max
Glyma.06G056300 2.0kb downstream 2.0kb downstream 10818 true Chr06: 4240910-4251727 Glycine max
Glyma.06G056300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 4249728-4251727 Glycine max
Glyma.06G056300 5.0kb upstream 5.0kb upstream 13818 true Chr06: 4235910-4249727 Glycine max
Glyma.06G056300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 4235910-4240909 Glycine max
Glyma.06G056300 5.0kb downstream 5.0kb downstream 13818 true Chr06: 4240910-4254727 Glycine max
Glyma.06G056300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 4249728-4254727 Glycine max
Glyma.06G056300 10.0kb upstream 10.0kb upstream 18818 true Chr06: 4230910-4249727 Glycine max
Glyma.06G056300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 4230910-4240909 Glycine max
Glyma.06G056300 10.0kb downstream 10.0kb downstream 18818 true Chr06: 4240910-4259727 Glycine max
Glyma.06G056300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 4249728-4259727 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308435 5265 Fabidae View MSA
124065227 5270 Rosid View MSA
123737112 5271 Pentapetalae View MSA
122796910 5272 Eudicot View MSA
122047959 5273 Angiosperm View MSA
121350289 5274 Embryophyte View MSA
123427971 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.9589 0.0 31.9879    
cufflinks 16.3486 0.0 44.257    
cufflinks 40.4198 0.0 120.667 High High
cufflinks 18.7591 0.0 51.2454    
cufflinks 7.11983 0.0 19.0724    
cufflinks 13.0713 0.0 35.0579    
cufflinks 11.619 0.0 31.0579    
cufflinks 6.36036 0.0 17.1143   Low
cufflinks 5.75924 0.0 15.5629   Low
cufflinks 7.295        
cufflinks 2.6       Low
cufflinks 17.479     High High
cufflinks 2.233       Low
cufflinks 1.475       Low
cufflinks 2.521       Low
cufflinks 6.703        
cufflinks 6.464     High  
cufflinks 8.833     High  
cufflinks 9.555     High  
cufflinks 6.486        
cufflinks 2.548       Low
cufflinks 8.108     High  
cufflinks 13.412     High High
cufflinks 3.983        
cufflinks 7.098     High  
cufflinks 4.664        

0 Strain