Gene : Glyma.06G057400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12483//PTHR12483:SF39 - SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS Genomic Order:  574
Name:  ? Glyma.06G057400 Secondary Identifier:  ? PAC:30552542
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G057400 0.5kb upstream 0.5kb upstream 1459 true Chr06: 4330457-4331915 Glycine max
Glyma.06G057400 0.5kb upstream 0.5kb upstream 500 false Chr06: 4331416-4331915 Glycine max
Glyma.06G057400 0.5kb downstream 0.5kb downstream 1459 true Chr06: 4329957-4331415 Glycine max
Glyma.06G057400 0.5kb downstream 0.5kb downstream 500 false Chr06: 4329957-4330456 Glycine max
Glyma.06G057400 1.0kb upstream 1.0kb upstream 1959 true Chr06: 4330457-4332415 Glycine max
Glyma.06G057400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 4331416-4332415 Glycine max
Glyma.06G057400 1.0kb downstream 1.0kb downstream 1959 true Chr06: 4329457-4331415 Glycine max
Glyma.06G057400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 4329457-4330456 Glycine max
Glyma.06G057400 2.0kb upstream 2.0kb upstream 2959 true Chr06: 4330457-4333415 Glycine max
Glyma.06G057400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 4331416-4333415 Glycine max
Glyma.06G057400 2.0kb downstream 2.0kb downstream 2959 true Chr06: 4328457-4331415 Glycine max
Glyma.06G057400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 4328457-4330456 Glycine max
Glyma.06G057400 5.0kb upstream 5.0kb upstream 5959 true Chr06: 4330457-4336415 Glycine max
Glyma.06G057400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 4331416-4336415 Glycine max
Glyma.06G057400 5.0kb downstream 5.0kb downstream 5959 true Chr06: 4325457-4331415 Glycine max
Glyma.06G057400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 4325457-4330456 Glycine max
Glyma.06G057400 10.0kb upstream 10.0kb upstream 10959 true Chr06: 4330457-4341415 Glycine max
Glyma.06G057400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 4331416-4341415 Glycine max
Glyma.06G057400 10.0kb downstream 10.0kb downstream 10959 true Chr06: 4320457-4331415 Glycine max
Glyma.06G057400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 4320457-4330456 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309978 5265 Fabidae View MSA
124062976 5270 Rosid View MSA
123743336 5271 Pentapetalae View MSA
122785642 5272 Eudicot View MSA
122044839 5273 Angiosperm View MSA
121351716 5274 Embryophyte View MSA
123428463 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.761 0.0 85.0967 High  
cufflinks 13.2353 0.0 37.8454   Low
cufflinks 47.1816 0.0 125.903 High High
cufflinks 26.7749 0.0 72.2418 High  
cufflinks 19.002 0.0 52.187    
cufflinks 20.4257 0.0 55.8603    
cufflinks 13.2114 0.0 37.6685   Low
cufflinks 24.6064 0.0 66.6892 High  
cufflinks 19.054 0.0 52.4132    
cufflinks 13.285     High  
cufflinks 7.536     High  
cufflinks 17.127     High High
cufflinks 3.656       Low
cufflinks 3.633       Low
cufflinks 19.528     High High
cufflinks 9.518     High  
cufflinks 13.353     High  
cufflinks 15.366     High  
cufflinks 11.809     High  
cufflinks 13.225     High  
cufflinks 5.527       Low
cufflinks 11.667     High  
cufflinks 12.512     High  
cufflinks 8.055     High  
cufflinks 8.694     High  
cufflinks 7.23     High  

0 Strain