Gene : Glyma.06G045200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR15138:SF14 - IP01149P-RELATED Genomic Order:  452
Name:  ? Glyma.06G045200 Secondary Identifier:  ? PAC:30552214
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G045200 0.5kb upstream 0.5kb upstream 9553 true Chr06: 3425933-3435485 Glycine max
Glyma.06G045200 0.5kb upstream 0.5kb upstream 500 false Chr06: 3434986-3435485 Glycine max
Glyma.06G045200 0.5kb downstream 0.5kb downstream 9553 true Chr06: 3425433-3434985 Glycine max
Glyma.06G045200 0.5kb downstream 0.5kb downstream 500 false Chr06: 3425433-3425932 Glycine max
Glyma.06G045200 1.0kb upstream 1.0kb upstream 10053 true Chr06: 3425933-3435985 Glycine max
Glyma.06G045200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3434986-3435985 Glycine max
Glyma.06G045200 1.0kb downstream 1.0kb downstream 10053 true Chr06: 3424933-3434985 Glycine max
Glyma.06G045200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3424933-3425932 Glycine max
Glyma.06G045200 2.0kb upstream 2.0kb upstream 11053 true Chr06: 3425933-3436985 Glycine max
Glyma.06G045200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3434986-3436985 Glycine max
Glyma.06G045200 2.0kb downstream 2.0kb downstream 11053 true Chr06: 3423933-3434985 Glycine max
Glyma.06G045200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3423933-3425932 Glycine max
Glyma.06G045200 5.0kb upstream 5.0kb upstream 14053 true Chr06: 3425933-3439985 Glycine max
Glyma.06G045200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3434986-3439985 Glycine max
Glyma.06G045200 5.0kb downstream 5.0kb downstream 14053 true Chr06: 3420933-3434985 Glycine max
Glyma.06G045200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3420933-3425932 Glycine max
Glyma.06G045200 10.0kb upstream 10.0kb upstream 19053 true Chr06: 3425933-3444985 Glycine max
Glyma.06G045200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3434986-3444985 Glycine max
Glyma.06G045200 10.0kb downstream 10.0kb downstream 19053 true Chr06: 3415933-3434985 Glycine max
Glyma.06G045200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3415933-3425932 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315456 5265 Fabidae View MSA
124062302 5270 Rosid View MSA
123738111 5271 Pentapetalae View MSA
122789940 5272 Eudicot View MSA
122043785 5273 Angiosperm View MSA
121346006 5274 Embryophyte View MSA
123428499 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.19908 0.0 38.7083   High
cufflinks 7.48772 0.0 31.2112    
cufflinks 9.26 0.0 49.2357   High
cufflinks 7.37511 0.0 28.111    
cufflinks 4.96884 0.0 21.2526   Low
cufflinks 5.47425 0.0 21.1501    
cufflinks 5.10975 0.0 19.7734   Low
cufflinks 7.3564 0.0 30.5287    
cufflinks 7.27122 0.0 30.2707    
cufflinks 0.581        
cufflinks 0.269       Low
cufflinks 0.846        
cufflinks 0.455        
cufflinks 0.393        
cufflinks 0.452        
cufflinks 0.867        
cufflinks 0.35       Low
cufflinks 0.825        
cufflinks 0.783        
cufflinks 1.029       High
cufflinks 0.293       Low
cufflinks 0.999       High
cufflinks 0.725        
cufflinks 0.306       Low
cufflinks 0.914       High
cufflinks 0.439        

0 Strain