Gene : Glyma.06G045300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31807:SF8 - QWRF MOTIF-CONTAINING PROTEIN 9 Genomic Order:  453
Name:  ? Glyma.06G045300 Secondary Identifier:  ? PAC:30552903
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G045300 0.5kb upstream 0.5kb upstream 4290 true Chr06: 3438085-3442374 Glycine max
Glyma.06G045300 0.5kb upstream 0.5kb upstream 500 false Chr06: 3438085-3438584 Glycine max
Glyma.06G045300 0.5kb downstream 0.5kb downstream 4290 true Chr06: 3438585-3442874 Glycine max
Glyma.06G045300 0.5kb downstream 0.5kb downstream 500 false Chr06: 3442375-3442874 Glycine max
Glyma.06G045300 1.0kb upstream 1.0kb upstream 4790 true Chr06: 3437585-3442374 Glycine max
Glyma.06G045300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3437585-3438584 Glycine max
Glyma.06G045300 1.0kb downstream 1.0kb downstream 4790 true Chr06: 3438585-3443374 Glycine max
Glyma.06G045300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3442375-3443374 Glycine max
Glyma.06G045300 2.0kb upstream 2.0kb upstream 5790 true Chr06: 3436585-3442374 Glycine max
Glyma.06G045300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3436585-3438584 Glycine max
Glyma.06G045300 2.0kb downstream 2.0kb downstream 5790 true Chr06: 3438585-3444374 Glycine max
Glyma.06G045300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3442375-3444374 Glycine max
Glyma.06G045300 5.0kb upstream 5.0kb upstream 8790 true Chr06: 3433585-3442374 Glycine max
Glyma.06G045300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3433585-3438584 Glycine max
Glyma.06G045300 5.0kb downstream 5.0kb downstream 8790 true Chr06: 3438585-3447374 Glycine max
Glyma.06G045300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3442375-3447374 Glycine max
Glyma.06G045300 10.0kb upstream 10.0kb upstream 13790 true Chr06: 3428585-3442374 Glycine max
Glyma.06G045300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3428585-3438584 Glycine max
Glyma.06G045300 10.0kb downstream 10.0kb downstream 13790 true Chr06: 3438585-3452374 Glycine max
Glyma.06G045300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3442375-3452374 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254805 5265 Fabidae View MSA
123996809 5270 Rosid View MSA
123571217 5271 Pentapetalae View MSA
122605945 5272 Eudicot View MSA
122044458 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.304746 0.0 1.47136    
cufflinks 3.14254 0.0 13.2311   High
cufflinks 0.0700798 0.0 0.285451 Low  
cufflinks 8.61145 0.0 31.4732   High
cufflinks 0.327689 0.0 1.62734    
cufflinks 0.0256596 0.0 0.114982 Low Low
cufflinks 0.0981549 0.0 0.392074 Low  
cufflinks 2.56153 0.0 11.3821    
cufflinks 0.590259 0.0 3.6194    
cufflinks 0.332       High
cufflinks 0.004     Low Low
cufflinks 0.039     Low  
cufflinks 0.038     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 0.052     Low  
cufflinks 0.027     Low  
cufflinks 0.106     Low  
cufflinks 0.49       High
cufflinks 0.034     Low  
cufflinks 0.011     Low  
cufflinks 0.052     Low  
cufflinks 0.043     Low  
cufflinks 0.002     Low Low
cufflinks 0.046     Low  
cufflinks 0.014     Low  

0 Strain