Gene : Glyma.06G046300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12354 - INTERFERON-RELATED DEVELOPMENTAL REGULATOR Genomic Order:  463
Name:  ? Glyma.06G046300 Secondary Identifier:  ? PAC:30550063
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G046300 0.5kb upstream 0.5kb upstream 5758 true Chr06: 3509707-3515464 Glycine max
Glyma.06G046300 0.5kb upstream 0.5kb upstream 500 false Chr06: 3509707-3510206 Glycine max
Glyma.06G046300 0.5kb downstream 0.5kb downstream 5758 true Chr06: 3510207-3515964 Glycine max
Glyma.06G046300 0.5kb downstream 0.5kb downstream 500 false Chr06: 3515465-3515964 Glycine max
Glyma.06G046300 1.0kb upstream 1.0kb upstream 6258 true Chr06: 3509207-3515464 Glycine max
Glyma.06G046300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3509207-3510206 Glycine max
Glyma.06G046300 1.0kb downstream 1.0kb downstream 6258 true Chr06: 3510207-3516464 Glycine max
Glyma.06G046300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3515465-3516464 Glycine max
Glyma.06G046300 2.0kb upstream 2.0kb upstream 7258 true Chr06: 3508207-3515464 Glycine max
Glyma.06G046300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3508207-3510206 Glycine max
Glyma.06G046300 2.0kb downstream 2.0kb downstream 7258 true Chr06: 3510207-3517464 Glycine max
Glyma.06G046300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3515465-3517464 Glycine max
Glyma.06G046300 5.0kb upstream 5.0kb upstream 10258 true Chr06: 3505207-3515464 Glycine max
Glyma.06G046300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3505207-3510206 Glycine max
Glyma.06G046300 5.0kb downstream 5.0kb downstream 10258 true Chr06: 3510207-3520464 Glycine max
Glyma.06G046300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3515465-3520464 Glycine max
Glyma.06G046300 10.0kb upstream 10.0kb upstream 15258 true Chr06: 3500207-3515464 Glycine max
Glyma.06G046300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3500207-3510206 Glycine max
Glyma.06G046300 10.0kb downstream 10.0kb downstream 15258 true Chr06: 3510207-3525464 Glycine max
Glyma.06G046300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3515465-3525464 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310652 5265 Fabidae View MSA
124065398 5270 Rosid View MSA
123738030 5271 Pentapetalae View MSA
122785868 5272 Eudicot View MSA
122043831 5273 Angiosperm View MSA
121349485 5274 Embryophyte View MSA
123428444 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.7514 0.0 125.218 High  
cufflinks 16.3883 0.0 43.7279    
cufflinks 230.64 0.0 891.13 High High
cufflinks 23.3086 0.0 62.4818 High  
cufflinks 21.4454 0.0 57.322 High  
cufflinks 50.9222 0.0 144.75 High  
cufflinks 14.4006 0.0 38.5182    
cufflinks 26.6854 0.0 71.859 High  
cufflinks 17.3192 0.0 46.2054    
cufflinks 15.488     High  
cufflinks 29.465     High High
cufflinks 50.607     High High
cufflinks 17.843     High  
cufflinks 10.909     High  
cufflinks 17.642     High  
cufflinks 8.485     High Low
cufflinks 22.151     High  
cufflinks 9.061     High  
cufflinks 7.87     High Low
cufflinks 7.877     High Low
cufflinks 19.85     High  
cufflinks 9.629     High  
cufflinks 9.613     High  
cufflinks 29.018     High High
cufflinks 9.388     High  
cufflinks 22.934     High  

0 Strain