Gene : Glyma.06G046500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR24098:SF4 - ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-RELATED Genomic Order:  465
Name:  ? Glyma.06G046500 Secondary Identifier:  ? PAC:30551573
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G046500 0.5kb upstream 0.5kb upstream 2315 true Chr06: 3521398-3523712 Glycine max
Glyma.06G046500 0.5kb upstream 0.5kb upstream 500 false Chr06: 3523213-3523712 Glycine max
Glyma.06G046500 0.5kb downstream 0.5kb downstream 2315 true Chr06: 3520898-3523212 Glycine max
Glyma.06G046500 0.5kb downstream 0.5kb downstream 500 false Chr06: 3520898-3521397 Glycine max
Glyma.06G046500 1.0kb upstream 1.0kb upstream 2815 true Chr06: 3521398-3524212 Glycine max
Glyma.06G046500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3523213-3524212 Glycine max
Glyma.06G046500 1.0kb downstream 1.0kb downstream 2815 true Chr06: 3520398-3523212 Glycine max
Glyma.06G046500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3520398-3521397 Glycine max
Glyma.06G046500 2.0kb upstream 2.0kb upstream 3815 true Chr06: 3521398-3525212 Glycine max
Glyma.06G046500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3523213-3525212 Glycine max
Glyma.06G046500 2.0kb downstream 2.0kb downstream 3815 true Chr06: 3519398-3523212 Glycine max
Glyma.06G046500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3519398-3521397 Glycine max
Glyma.06G046500 5.0kb upstream 5.0kb upstream 6815 true Chr06: 3521398-3528212 Glycine max
Glyma.06G046500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3523213-3528212 Glycine max
Glyma.06G046500 5.0kb downstream 5.0kb downstream 6815 true Chr06: 3516398-3523212 Glycine max
Glyma.06G046500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3516398-3521397 Glycine max
Glyma.06G046500 10.0kb upstream 10.0kb upstream 11815 true Chr06: 3521398-3533212 Glycine max
Glyma.06G046500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3523213-3533212 Glycine max
Glyma.06G046500 10.0kb downstream 10.0kb downstream 11815 true Chr06: 3511398-3523212 Glycine max
Glyma.06G046500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3511398-3521397 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314856 5265 Fabidae View MSA
124072957 5270 Rosid View MSA
123753640 5271 Pentapetalae View MSA
122796648 5272 Eudicot View MSA
122050898 5273 Angiosperm View MSA
121351041 5274 Embryophyte View MSA
123425735 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0330849 0.0 0.137197 Low  
cufflinks 0.132172 0.0 0.515852 Low High
cufflinks 0.0181068 0.0 0.0784311 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0331791 0.0 0.137402 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.113     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  

0 Strain