Gene : Glyma.06G047000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24206:SF35 - TRANSCRIPTION FACTOR-RELATED Genomic Order:  470
Name:  ? Glyma.06G047000 Secondary Identifier:  ? PAC:30550126
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G047000 0.5kb upstream 0.5kb upstream 2810 true Chr06: 3544367-3547176 Glycine max
Glyma.06G047000 0.5kb upstream 0.5kb upstream 500 false Chr06: 3544367-3544866 Glycine max
Glyma.06G047000 0.5kb downstream 0.5kb downstream 2810 true Chr06: 3544867-3547676 Glycine max
Glyma.06G047000 0.5kb downstream 0.5kb downstream 500 false Chr06: 3547177-3547676 Glycine max
Glyma.06G047000 1.0kb upstream 1.0kb upstream 3310 true Chr06: 3543867-3547176 Glycine max
Glyma.06G047000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3543867-3544866 Glycine max
Glyma.06G047000 1.0kb downstream 1.0kb downstream 3310 true Chr06: 3544867-3548176 Glycine max
Glyma.06G047000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3547177-3548176 Glycine max
Glyma.06G047000 2.0kb upstream 2.0kb upstream 4310 true Chr06: 3542867-3547176 Glycine max
Glyma.06G047000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3542867-3544866 Glycine max
Glyma.06G047000 2.0kb downstream 2.0kb downstream 4310 true Chr06: 3544867-3549176 Glycine max
Glyma.06G047000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3547177-3549176 Glycine max
Glyma.06G047000 5.0kb upstream 5.0kb upstream 7310 true Chr06: 3539867-3547176 Glycine max
Glyma.06G047000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3539867-3544866 Glycine max
Glyma.06G047000 5.0kb downstream 5.0kb downstream 7310 true Chr06: 3544867-3552176 Glycine max
Glyma.06G047000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3547177-3552176 Glycine max
Glyma.06G047000 10.0kb upstream 10.0kb upstream 12310 true Chr06: 3534867-3547176 Glycine max
Glyma.06G047000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3534867-3544866 Glycine max
Glyma.06G047000 10.0kb downstream 10.0kb downstream 12310 true Chr06: 3544867-3557176 Glycine max
Glyma.06G047000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3547177-3557176 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309325 5265 Fabidae View MSA
124066867 5270 Rosid View MSA
123744734 5271 Pentapetalae View MSA
122789493 5272 Eudicot View MSA
122049992 5273 Angiosperm View MSA
121348284 5274 Embryophyte View MSA
123426269 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.8553 0.0 151.963 High  
cufflinks 57.9319 0.0 208.351 High  
cufflinks 23.6589 0.0 86.2177 High Low
cufflinks 146.349 0.0 646.57 High High
cufflinks 28.1428 0.0 101.129 High  
cufflinks 124.017 0.0 517.341 High High
cufflinks 63.3774 0.0 230.548 High  
cufflinks 66.1239 0.0 242.502 High  
cufflinks 22.226 0.0 81.7774 High Low
cufflinks 25.23     High High
cufflinks 2.002        
cufflinks 9.837     High  
cufflinks 7.439     High  
cufflinks 4.614        
cufflinks 0.372       Low
cufflinks 9.983     High  
cufflinks 3.981        
cufflinks 10.255     High  
cufflinks 12.554     High  
cufflinks 16.158     High  
cufflinks 2.5        
cufflinks 11.56     High  
cufflinks 8.339     High  
cufflinks 1.691       Low
cufflinks 14.149     High  
cufflinks 2.681        

0 Strain