Gene : Glyma.06G047700 G. max Wm82.a2.v1
Defline:  (1 of 2) 2.3.1.43 - Phosphatidylcholine--sterol O-acyltransferase / Phospholipid--cholesterol acyltransferase Genomic Order:  477
Name:  ? Glyma.06G047700 Secondary Identifier:  ? PAC:30554229
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G047700 0.5kb upstream 0.5kb upstream 2699 true Chr06: 3602471-3605169 Glycine max
Glyma.06G047700 0.5kb upstream 0.5kb upstream 500 false Chr06: 3602471-3602970 Glycine max
Glyma.06G047700 0.5kb downstream 0.5kb downstream 2699 true Chr06: 3602971-3605669 Glycine max
Glyma.06G047700 0.5kb downstream 0.5kb downstream 500 false Chr06: 3605170-3605669 Glycine max
Glyma.06G047700 1.0kb upstream 1.0kb upstream 3199 true Chr06: 3601971-3605169 Glycine max
Glyma.06G047700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3601971-3602970 Glycine max
Glyma.06G047700 1.0kb downstream 1.0kb downstream 3199 true Chr06: 3602971-3606169 Glycine max
Glyma.06G047700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3605170-3606169 Glycine max
Glyma.06G047700 2.0kb upstream 2.0kb upstream 4199 true Chr06: 3600971-3605169 Glycine max
Glyma.06G047700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3600971-3602970 Glycine max
Glyma.06G047700 2.0kb downstream 2.0kb downstream 4199 true Chr06: 3602971-3607169 Glycine max
Glyma.06G047700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3605170-3607169 Glycine max
Glyma.06G047700 5.0kb upstream 5.0kb upstream 7199 true Chr06: 3597971-3605169 Glycine max
Glyma.06G047700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3597971-3602970 Glycine max
Glyma.06G047700 5.0kb downstream 5.0kb downstream 7199 true Chr06: 3602971-3610169 Glycine max
Glyma.06G047700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3605170-3610169 Glycine max
Glyma.06G047700 10.0kb upstream 10.0kb upstream 12199 true Chr06: 3592971-3605169 Glycine max
Glyma.06G047700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3592971-3602970 Glycine max
Glyma.06G047700 10.0kb downstream 10.0kb downstream 12199 true Chr06: 3602971-3615169 Glycine max
Glyma.06G047700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3605170-3615169 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299956 5265 Fabidae View MSA
124050426 5270 Rosid View MSA
123738135 5271 Pentapetalae View MSA
122785925 5272 Eudicot View MSA
122051550 5273 Angiosperm View MSA
121347013 5274 Embryophyte View MSA
123427608 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.1213 0.0 59.0662   High
cufflinks 10.4433 0.0 28.3846    
cufflinks 6.48126 0.0 18.3012    
cufflinks 6.3336 0.0 17.9463    
cufflinks 1.02832 0.0 3.65119    
cufflinks 0.856145 0.0 3.07685   Low
cufflinks 5.65374 0.0 16.2781    
cufflinks 2.88547 0.0 9.07926    
cufflinks 0.365433 0.0 1.37509   Low
cufflinks 3.247        
cufflinks 0.062       Low
cufflinks 6.945        
cufflinks 0.671        
cufflinks 0.224        
cufflinks 0.05     Low Low
cufflinks 7.693     High  
cufflinks 0.111        
cufflinks 8.084     High  
cufflinks 4.983        
cufflinks 9.691     High High
cufflinks 0.103       Low
cufflinks 9.41     High High
cufflinks 6.875        
cufflinks 0.045     Low Low
cufflinks 9.903     High High
cufflinks 0.118        

0 Strain