Gene : Glyma.06G049700 G. max Wm82.a2.v1
Genomic Order:  497 Name:  ? Glyma.06G049700
Secondary Identifier:  ? PAC:30549190
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G049700 0.5kb upstream 0.5kb upstream 3754 true Chr06: 3745746-3749499 Glycine max
Glyma.06G049700 0.5kb upstream 0.5kb upstream 500 false Chr06: 3745746-3746245 Glycine max
Glyma.06G049700 0.5kb downstream 0.5kb downstream 3754 true Chr06: 3746246-3749999 Glycine max
Glyma.06G049700 0.5kb downstream 0.5kb downstream 500 false Chr06: 3749500-3749999 Glycine max
Glyma.06G049700 1.0kb upstream 1.0kb upstream 4254 true Chr06: 3745246-3749499 Glycine max
Glyma.06G049700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3745246-3746245 Glycine max
Glyma.06G049700 1.0kb downstream 1.0kb downstream 4254 true Chr06: 3746246-3750499 Glycine max
Glyma.06G049700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3749500-3750499 Glycine max
Glyma.06G049700 2.0kb upstream 2.0kb upstream 5254 true Chr06: 3744246-3749499 Glycine max
Glyma.06G049700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3744246-3746245 Glycine max
Glyma.06G049700 2.0kb downstream 2.0kb downstream 5254 true Chr06: 3746246-3751499 Glycine max
Glyma.06G049700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3749500-3751499 Glycine max
Glyma.06G049700 5.0kb upstream 5.0kb upstream 8254 true Chr06: 3741246-3749499 Glycine max
Glyma.06G049700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3741246-3746245 Glycine max
Glyma.06G049700 5.0kb downstream 5.0kb downstream 8254 true Chr06: 3746246-3754499 Glycine max
Glyma.06G049700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3749500-3754499 Glycine max
Glyma.06G049700 10.0kb upstream 10.0kb upstream 13254 true Chr06: 3736246-3749499 Glycine max
Glyma.06G049700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3736246-3746245 Glycine max
Glyma.06G049700 10.0kb downstream 10.0kb downstream 13254 true Chr06: 3746246-3759499 Glycine max
Glyma.06G049700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3749500-3759499 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314102 5265 Fabidae View MSA
124071279 5270 Rosid View MSA
123741561 5271 Pentapetalae View MSA
122793729 5272 Eudicot View MSA
122046914 5273 Angiosperm View MSA
121346095 5274 Embryophyte View MSA
123380327 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.42652 0.0 21.1771   Low
cufflinks 9.34717 0.0 35.0804    
cufflinks 4.05895 0.0 19.7799   Low
cufflinks 15.3912 0.0 59.2554    
cufflinks 12.3877 0.0 50.7492    
cufflinks 15.6389 0.0 59.3429    
cufflinks 3.94282 0.0 19.7046   Low
cufflinks 21.234 0.0 80.0141 High High
cufflinks 9.18671 0.0 36.2249    
cufflinks 2.206       High
cufflinks 1.315        
cufflinks 0.622       Low
cufflinks 1.09        
cufflinks 1.168        
cufflinks 0.426       Low
cufflinks 0.954        
cufflinks 2.069       High
cufflinks 1.07        
cufflinks 1.045        
cufflinks 0.711       Low
cufflinks 1.437        
cufflinks 0.966        
cufflinks 1.209        
cufflinks 1.349        
cufflinks 0.797        
cufflinks 1.442        

0 Strain