Gene : Glyma.06G050200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31490:SF1 - F19C14.2 PROTEIN-RELATED Genomic Order:  502
Name:  ? Glyma.06G050200 Secondary Identifier:  ? PAC:30549631
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G050200 0.5kb upstream 0.5kb upstream 4836 true Chr06: 3813696-3818531 Glycine max
Glyma.06G050200 0.5kb upstream 0.5kb upstream 500 false Chr06: 3818032-3818531 Glycine max
Glyma.06G050200 0.5kb downstream 0.5kb downstream 4836 true Chr06: 3813196-3818031 Glycine max
Glyma.06G050200 0.5kb downstream 0.5kb downstream 500 false Chr06: 3813196-3813695 Glycine max
Glyma.06G050200 1.0kb upstream 1.0kb upstream 5336 true Chr06: 3813696-3819031 Glycine max
Glyma.06G050200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3818032-3819031 Glycine max
Glyma.06G050200 1.0kb downstream 1.0kb downstream 5336 true Chr06: 3812696-3818031 Glycine max
Glyma.06G050200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3812696-3813695 Glycine max
Glyma.06G050200 2.0kb upstream 2.0kb upstream 6336 true Chr06: 3813696-3820031 Glycine max
Glyma.06G050200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3818032-3820031 Glycine max
Glyma.06G050200 2.0kb downstream 2.0kb downstream 6336 true Chr06: 3811696-3818031 Glycine max
Glyma.06G050200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3811696-3813695 Glycine max
Glyma.06G050200 5.0kb upstream 5.0kb upstream 9336 true Chr06: 3813696-3823031 Glycine max
Glyma.06G050200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3818032-3823031 Glycine max
Glyma.06G050200 5.0kb downstream 5.0kb downstream 9336 true Chr06: 3808696-3818031 Glycine max
Glyma.06G050200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3808696-3813695 Glycine max
Glyma.06G050200 10.0kb upstream 10.0kb upstream 14336 true Chr06: 3813696-3828031 Glycine max
Glyma.06G050200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3818032-3828031 Glycine max
Glyma.06G050200 10.0kb downstream 10.0kb downstream 14336 true Chr06: 3803696-3818031 Glycine max
Glyma.06G050200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3803696-3813695 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297174 5265 Fabidae View MSA
124066828 5270 Rosid View MSA
123742236 5271 Pentapetalae View MSA
122786340 5272 Eudicot View MSA
122047511 5273 Angiosperm View MSA
121347321 5274 Embryophyte View MSA
123426707 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.216741 0.0 1.06084 Low Low
cufflinks 0.961894 0.0 4.83701    
cufflinks 0.574819 0.0 3.19436    
cufflinks 0.786731 0.0 4.10714    
cufflinks 0.914568 0.0 4.62553    
cufflinks 0.586333 0.0 2.56289    
cufflinks 0.898312 0.0 4.59536    
cufflinks 1.00721 0.0 3.71502    
cufflinks 1.70483 0.0 5.48384   High
cufflinks 1.779       High
cufflinks 0.142        
cufflinks 0.759        
cufflinks 1.669        
cufflinks 0.317        
cufflinks 0.011     Low Low
cufflinks 1.163        
cufflinks 0.224        
cufflinks 1.101        
cufflinks 0.336        
cufflinks 1.244        
cufflinks 0.25        
cufflinks 1.252        
cufflinks 0.809        
cufflinks 0.163        
cufflinks 1.174        
cufflinks 0.467        

0 Strain