Gene : Glyma.06G051100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11108:SF4 - FERROCHELATASE-1, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  511
Name:  ? Glyma.06G051100 Secondary Identifier:  ? PAC:30552053
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax HEME-BIOSYNTHESIS-II Glycine max pathologic  
Gmax PWY-5918 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G051100 0.5kb upstream 0.5kb upstream 4952 true Chr06: 3873414-3878365 Glycine max
Glyma.06G051100 0.5kb upstream 0.5kb upstream 500 false Chr06: 3873414-3873913 Glycine max
Glyma.06G051100 0.5kb downstream 0.5kb downstream 4952 true Chr06: 3873914-3878865 Glycine max
Glyma.06G051100 0.5kb downstream 0.5kb downstream 500 false Chr06: 3878366-3878865 Glycine max
Glyma.06G051100 1.0kb upstream 1.0kb upstream 5452 true Chr06: 3872914-3878365 Glycine max
Glyma.06G051100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3872914-3873913 Glycine max
Glyma.06G051100 1.0kb downstream 1.0kb downstream 5452 true Chr06: 3873914-3879365 Glycine max
Glyma.06G051100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3878366-3879365 Glycine max
Glyma.06G051100 2.0kb upstream 2.0kb upstream 6452 true Chr06: 3871914-3878365 Glycine max
Glyma.06G051100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3871914-3873913 Glycine max
Glyma.06G051100 2.0kb downstream 2.0kb downstream 6452 true Chr06: 3873914-3880365 Glycine max
Glyma.06G051100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3878366-3880365 Glycine max
Glyma.06G051100 5.0kb upstream 5.0kb upstream 9452 true Chr06: 3868914-3878365 Glycine max
Glyma.06G051100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3868914-3873913 Glycine max
Glyma.06G051100 5.0kb downstream 5.0kb downstream 9452 true Chr06: 3873914-3883365 Glycine max
Glyma.06G051100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3878366-3883365 Glycine max
Glyma.06G051100 10.0kb upstream 10.0kb upstream 14452 true Chr06: 3863914-3878365 Glycine max
Glyma.06G051100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3863914-3873913 Glycine max
Glyma.06G051100 10.0kb downstream 10.0kb downstream 14452 true Chr06: 3873914-3888365 Glycine max
Glyma.06G051100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3878366-3888365 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305462 5265 Fabidae View MSA
124062262 5270 Rosid View MSA
123738607 5271 Pentapetalae View MSA
122786704 5272 Eudicot View MSA
122047545 5273 Angiosperm View MSA
121310756 5274 Embryophyte View MSA
123426598 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.65062 0.0 13.0894    
cufflinks 3.85572 0.0 11.0572   Low
cufflinks 17.1726 0.0 46.0513   High
cufflinks 8.12407 0.0 21.9023    
cufflinks 5.62336 0.0 15.5508    
cufflinks 6.96126 0.0 18.9177    
cufflinks 7.29719 0.0 19.824    
cufflinks 7.11966 0.0 19.3319    
cufflinks 5.65462 0.0 15.5989    
cufflinks 4.041        
cufflinks 3.51        
cufflinks 9.312     High High
cufflinks 4.563        
cufflinks 3.957        
cufflinks 1.93        
cufflinks 1.716       Low
cufflinks 6.946     High High
cufflinks 6.478       High
cufflinks 3.143        
cufflinks 1.591       Low
cufflinks 3.427        
cufflinks 1.893       Low
cufflinks 2.017        
cufflinks 4.108        
cufflinks 1.514       Low
cufflinks 3.865        

0 Strain