Gene : Glyma.06G089800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR14217:SF3 - INOSITOL-TETRAKISPHOSPHATE 1-KINASE 2-RELATED Genomic Order:  898
Name:  ? Glyma.06G089800 Secondary Identifier:  ? PAC:30549988
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6365 Glycine max pathologic  
Gmax PWY-6366 Glycine max pathologic  
Gmax PWY-6554 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G089800 0.5kb upstream 0.5kb upstream 7318 true Chr06: 6956376-6963693 Glycine max
Glyma.06G089800 0.5kb upstream 0.5kb upstream 500 false Chr06: 6963194-6963693 Glycine max
Glyma.06G089800 0.5kb downstream 0.5kb downstream 7318 true Chr06: 6955876-6963193 Glycine max
Glyma.06G089800 0.5kb downstream 0.5kb downstream 500 false Chr06: 6955876-6956375 Glycine max
Glyma.06G089800 1.0kb upstream 1.0kb upstream 7818 true Chr06: 6956376-6964193 Glycine max
Glyma.06G089800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 6963194-6964193 Glycine max
Glyma.06G089800 1.0kb downstream 1.0kb downstream 7818 true Chr06: 6955376-6963193 Glycine max
Glyma.06G089800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 6955376-6956375 Glycine max
Glyma.06G089800 2.0kb upstream 2.0kb upstream 8818 true Chr06: 6956376-6965193 Glycine max
Glyma.06G089800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 6963194-6965193 Glycine max
Glyma.06G089800 2.0kb downstream 2.0kb downstream 8818 true Chr06: 6954376-6963193 Glycine max
Glyma.06G089800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 6954376-6956375 Glycine max
Glyma.06G089800 5.0kb upstream 5.0kb upstream 11818 true Chr06: 6956376-6968193 Glycine max
Glyma.06G089800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 6963194-6968193 Glycine max
Glyma.06G089800 5.0kb downstream 5.0kb downstream 11818 true Chr06: 6951376-6963193 Glycine max
Glyma.06G089800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 6951376-6956375 Glycine max
Glyma.06G089800 10.0kb upstream 10.0kb upstream 16818 true Chr06: 6956376-6973193 Glycine max
Glyma.06G089800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 6963194-6973193 Glycine max
Glyma.06G089800 10.0kb downstream 10.0kb downstream 16818 true Chr06: 6946376-6963193 Glycine max
Glyma.06G089800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 6946376-6956375 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041123 5273 Angiosperm View MSA
122308834 5265 Fabidae View MSA
124060852 5270 Rosid View MSA
123745462 5271 Pentapetalae View MSA
122790071 5272 Eudicot View MSA
121347833 5274 Embryophyte View MSA
123428803 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.6087 0.0 100.084 High  
cufflinks 9.6987 0.0 42.5096   Low
cufflinks 27.2674 0.0 120.188 High  
cufflinks 28.2741 0.0 123.79 High  
cufflinks 23.5175 0.0 108.326 High  
cufflinks 7.75562 0.0 39.1033   Low
cufflinks 12.1201 0.0 42.3958    
cufflinks 10.157 0.0 44.5389    
cufflinks 33.9269 0.0 145.662 High High
cufflinks 8.651     High  
cufflinks 9.999     High  
cufflinks 4.223        
cufflinks 1.065       Low
cufflinks 0.512       Low
cufflinks 18.853     High High
cufflinks 3.978        
cufflinks 10.486     High  
cufflinks 4.843        
cufflinks 1.021       Low
cufflinks 4.489        
cufflinks 3.992        
cufflinks 3.239        
cufflinks 3.917        
cufflinks 6.165     High  
cufflinks 5.068        
cufflinks 9.607     High  

0 Strain