Gene : Glyma.06G083800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10896//PTHR10896:SF27 - GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE Genomic Order:  838
Name:  ? Glyma.06G083800 Secondary Identifier:  ? PAC:30549392
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5800 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G083800 0.5kb upstream 0.5kb upstream 3649 true Chr06: 6450692-6454340 Glycine max
Glyma.06G083800 0.5kb upstream 0.5kb upstream 500 false Chr06: 6450692-6451191 Glycine max
Glyma.06G083800 0.5kb downstream 0.5kb downstream 3649 true Chr06: 6451192-6454840 Glycine max
Glyma.06G083800 0.5kb downstream 0.5kb downstream 500 false Chr06: 6454341-6454840 Glycine max
Glyma.06G083800 1.0kb upstream 1.0kb upstream 4149 true Chr06: 6450192-6454340 Glycine max
Glyma.06G083800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 6450192-6451191 Glycine max
Glyma.06G083800 1.0kb downstream 1.0kb downstream 4149 true Chr06: 6451192-6455340 Glycine max
Glyma.06G083800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 6454341-6455340 Glycine max
Glyma.06G083800 2.0kb upstream 2.0kb upstream 5149 true Chr06: 6449192-6454340 Glycine max
Glyma.06G083800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 6449192-6451191 Glycine max
Glyma.06G083800 2.0kb downstream 2.0kb downstream 5149 true Chr06: 6451192-6456340 Glycine max
Glyma.06G083800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 6454341-6456340 Glycine max
Glyma.06G083800 5.0kb upstream 5.0kb upstream 8149 true Chr06: 6446192-6454340 Glycine max
Glyma.06G083800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 6446192-6451191 Glycine max
Glyma.06G083800 5.0kb downstream 5.0kb downstream 8149 true Chr06: 6451192-6459340 Glycine max
Glyma.06G083800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 6454341-6459340 Glycine max
Glyma.06G083800 10.0kb upstream 10.0kb upstream 13149 true Chr06: 6441192-6454340 Glycine max
Glyma.06G083800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 6441192-6451191 Glycine max
Glyma.06G083800 10.0kb downstream 10.0kb downstream 13149 true Chr06: 6451192-6464340 Glycine max
Glyma.06G083800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 6454341-6464340 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308120 5265 Fabidae View MSA
124070512 5270 Rosid View MSA
123748669 5271 Pentapetalae View MSA
122794067 5272 Eudicot View MSA
122050395 5273 Angiosperm View MSA
121346281 5274 Embryophyte View MSA
123380360 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.623171 0.0 2.25626   Low
cufflinks 4.00046 0.0 11.6741    
cufflinks 0.829677 0.0 2.933   Low
cufflinks 1.72341 0.0 5.65967    
cufflinks 4.4943 0.0 12.9832   High
cufflinks 3.20445 0.0 9.64233    
cufflinks 2.18091 0.0 6.9726    
cufflinks 3.10484 0.0 9.36793    
cufflinks 2.9417 0.0 8.94848    
cufflinks 2.962        
cufflinks 0.322       Low
cufflinks 1.736        
cufflinks 5.051       High
cufflinks 7.035     High High
cufflinks 0.231       Low
cufflinks 1.979        
cufflinks 0.672        
cufflinks 3.114        
cufflinks 4.099       High
cufflinks 1.272        
cufflinks 0.372       Low
cufflinks 1.46        
cufflinks 2.342        
cufflinks 0.486       Low
cufflinks 1.769        
cufflinks 1.012        

0 Strain