Gene : Glyma.06G086200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12649:SF12 - PEPTIDYL-TRNA HYDROLASE II (PTH2) FAMILY PROTEIN Genomic Order:  862
Name:  ? Glyma.06G086200 Secondary Identifier:  ? PAC:30553146
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G086200 0.5kb upstream 0.5kb upstream 4502 true Chr06: 6652080-6656581 Glycine max
Glyma.06G086200 0.5kb upstream 0.5kb upstream 500 false Chr06: 6652080-6652579 Glycine max
Glyma.06G086200 0.5kb downstream 0.5kb downstream 4502 true Chr06: 6652580-6657081 Glycine max
Glyma.06G086200 0.5kb downstream 0.5kb downstream 500 false Chr06: 6656582-6657081 Glycine max
Glyma.06G086200 1.0kb upstream 1.0kb upstream 5002 true Chr06: 6651580-6656581 Glycine max
Glyma.06G086200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 6651580-6652579 Glycine max
Glyma.06G086200 1.0kb downstream 1.0kb downstream 5002 true Chr06: 6652580-6657581 Glycine max
Glyma.06G086200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 6656582-6657581 Glycine max
Glyma.06G086200 2.0kb upstream 2.0kb upstream 6002 true Chr06: 6650580-6656581 Glycine max
Glyma.06G086200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 6650580-6652579 Glycine max
Glyma.06G086200 2.0kb downstream 2.0kb downstream 6002 true Chr06: 6652580-6658581 Glycine max
Glyma.06G086200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 6656582-6658581 Glycine max
Glyma.06G086200 5.0kb upstream 5.0kb upstream 9002 true Chr06: 6647580-6656581 Glycine max
Glyma.06G086200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 6647580-6652579 Glycine max
Glyma.06G086200 5.0kb downstream 5.0kb downstream 9002 true Chr06: 6652580-6661581 Glycine max
Glyma.06G086200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 6656582-6661581 Glycine max
Glyma.06G086200 10.0kb upstream 10.0kb upstream 14002 true Chr06: 6642580-6656581 Glycine max
Glyma.06G086200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 6642580-6652579 Glycine max
Glyma.06G086200 10.0kb downstream 10.0kb downstream 14002 true Chr06: 6652580-6666581 Glycine max
Glyma.06G086200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 6656582-6666581 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041458 5273 Angiosperm View MSA
122300216 5265 Fabidae View MSA
124065431 5270 Rosid View MSA
123745404 5271 Pentapetalae View MSA
122792467 5272 Eudicot View MSA
121347943 5274 Embryophyte View MSA
123426949 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.75209 0.0 38.2687    
cufflinks 11.4254 0.0 43.3733   High
cufflinks 8.74218 0.0 35.4457    
cufflinks 8.84938 0.0 30.4381    
cufflinks 8.08145 0.0 33.3857    
cufflinks 7.20597 0.0 30.8645   Low
cufflinks 11.5784 0.0 44.2057   High
cufflinks 7.36601 0.0 31.101   Low
cufflinks 8.31089 0.0 33.995    
cufflinks 0.717        
cufflinks 0.516       Low
cufflinks 1.24        
cufflinks 0.804        
cufflinks 0.808        
cufflinks 0.64        
cufflinks 1.382       High
cufflinks 0.567       Low
cufflinks 1.294        
cufflinks 1.115        
cufflinks 1.427       High
cufflinks 0.41       Low
cufflinks 1.508       High
cufflinks 1.483       High
cufflinks 0.63        
cufflinks 1.308        
cufflinks 0.626        

0 Strain