Gene : Glyma.06G087800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23406:SF31 - NADP-DEPENDENT MALIC ENZYME 2-RELATED Genomic Order:  878
Name:  ? Glyma.06G087800 Secondary Identifier:  ? PAC:30549952
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLUCONEO-PWY Glycine max pathologic  
Gmax PWY-241 Glycine max pathologic  
Gmax PWY-7117 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G087800 0.5kb upstream 0.5kb upstream 5812 true Chr06: 6787936-6793747 Glycine max
Glyma.06G087800 0.5kb upstream 0.5kb upstream 500 false Chr06: 6787936-6788435 Glycine max
Glyma.06G087800 0.5kb downstream 0.5kb downstream 5812 true Chr06: 6788436-6794247 Glycine max
Glyma.06G087800 0.5kb downstream 0.5kb downstream 500 false Chr06: 6793748-6794247 Glycine max
Glyma.06G087800 1.0kb upstream 1.0kb upstream 6312 true Chr06: 6787436-6793747 Glycine max
Glyma.06G087800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 6787436-6788435 Glycine max
Glyma.06G087800 1.0kb downstream 1.0kb downstream 6312 true Chr06: 6788436-6794747 Glycine max
Glyma.06G087800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 6793748-6794747 Glycine max
Glyma.06G087800 2.0kb upstream 2.0kb upstream 7312 true Chr06: 6786436-6793747 Glycine max
Glyma.06G087800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 6786436-6788435 Glycine max
Glyma.06G087800 2.0kb downstream 2.0kb downstream 7312 true Chr06: 6788436-6795747 Glycine max
Glyma.06G087800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 6793748-6795747 Glycine max
Glyma.06G087800 5.0kb upstream 5.0kb upstream 10312 true Chr06: 6783436-6793747 Glycine max
Glyma.06G087800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 6783436-6788435 Glycine max
Glyma.06G087800 5.0kb downstream 5.0kb downstream 10312 true Chr06: 6788436-6798747 Glycine max
Glyma.06G087800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 6793748-6798747 Glycine max
Glyma.06G087800 10.0kb upstream 10.0kb upstream 15312 true Chr06: 6778436-6793747 Glycine max
Glyma.06G087800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 6778436-6788435 Glycine max
Glyma.06G087800 10.0kb downstream 10.0kb downstream 15312 true Chr06: 6788436-6803747 Glycine max
Glyma.06G087800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 6793748-6803747 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306748 5265 Fabidae View MSA
124068705 5270 Rosid View MSA
123751350 5271 Pentapetalae View MSA
122794130 5272 Eudicot View MSA
122042224 5273 Angiosperm View MSA
121345569 5274 Embryophyte View MSA
123428715 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.31229 0.0 9.46079    
cufflinks 2.29906 0.0 11.4896    
cufflinks 1.86749 0.0 9.73222    
cufflinks 2.32526 0.0 11.153    
cufflinks 4.00314 0.0 14.2153    
cufflinks 36.7872 0.0 140.695 High High
cufflinks 1.38951 0.0 7.98288    
cufflinks 2.73703 0.0 12.3821    
cufflinks 3.74875 0.0 17.4434    
cufflinks 0.974        
cufflinks 8.118     High High
cufflinks 0.592        
cufflinks 2.477        
cufflinks 0.902        
cufflinks 2.017        
cufflinks 1.301        
cufflinks 14.926     High High
cufflinks 0.388       Low
cufflinks 0.356       Low
cufflinks 0.75        
cufflinks 9.274     High High
cufflinks 0.658        
cufflinks 1.607        
cufflinks 6.953     High High
cufflinks 0.968        
cufflinks 13.314     High High

0 Strain