Gene : Glyma.06G078100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13871:SF38 - PROTEIN C32D5.8, ISOFORM B-RELATED Genomic Order:  781
Name:  ? Glyma.06G078100 Secondary Identifier:  ? PAC:30550645
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G078100 0.5kb upstream 0.5kb upstream 3834 true Chr06: 6046280-6050113 Glycine max
Glyma.06G078100 0.5kb upstream 0.5kb upstream 500 false Chr06: 6049614-6050113 Glycine max
Glyma.06G078100 0.5kb downstream 0.5kb downstream 3834 true Chr06: 6045780-6049613 Glycine max
Glyma.06G078100 0.5kb downstream 0.5kb downstream 500 false Chr06: 6045780-6046279 Glycine max
Glyma.06G078100 1.0kb upstream 1.0kb upstream 4334 true Chr06: 6046280-6050613 Glycine max
Glyma.06G078100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 6049614-6050613 Glycine max
Glyma.06G078100 1.0kb downstream 1.0kb downstream 4334 true Chr06: 6045280-6049613 Glycine max
Glyma.06G078100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 6045280-6046279 Glycine max
Glyma.06G078100 2.0kb upstream 2.0kb upstream 5334 true Chr06: 6046280-6051613 Glycine max
Glyma.06G078100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 6049614-6051613 Glycine max
Glyma.06G078100 2.0kb downstream 2.0kb downstream 5334 true Chr06: 6044280-6049613 Glycine max
Glyma.06G078100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 6044280-6046279 Glycine max
Glyma.06G078100 5.0kb upstream 5.0kb upstream 8334 true Chr06: 6046280-6054613 Glycine max
Glyma.06G078100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 6049614-6054613 Glycine max
Glyma.06G078100 5.0kb downstream 5.0kb downstream 8334 true Chr06: 6041280-6049613 Glycine max
Glyma.06G078100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 6041280-6046279 Glycine max
Glyma.06G078100 10.0kb upstream 10.0kb upstream 13334 true Chr06: 6046280-6059613 Glycine max
Glyma.06G078100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 6049614-6059613 Glycine max
Glyma.06G078100 10.0kb downstream 10.0kb downstream 13334 true Chr06: 6036280-6049613 Glycine max
Glyma.06G078100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 6036280-6046279 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301383 5265 Fabidae View MSA
124068677 5270 Rosid View MSA
123752154 5271 Pentapetalae View MSA
122790586 5272 Eudicot View MSA
122048350 5273 Angiosperm View MSA
123428873 5275 Viridiplantae View MSA
121310937 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.2156 0.0 52.2405    
cufflinks 8.70011 0.0 29.6848    
cufflinks 91.7726 0.0 352.514 High High
cufflinks 7.21675 0.0 25.4555    
cufflinks 6.47239 0.0 23.4774    
cufflinks 13.8175 0.0 44.7595    
cufflinks 16.1682 0.0 53.0162    
cufflinks 11.3235 0.0 37.4963    
cufflinks 8.9156 0.0 30.2489    
cufflinks 0.651       Low
cufflinks 11.71     High High
cufflinks 18.272     High High
cufflinks 0.74       Low
cufflinks 1.267        
cufflinks 2.431        
cufflinks 4.665        
cufflinks 2.172        
cufflinks 3.033        
cufflinks 1.524        
cufflinks 10.903     High High
cufflinks 6.301     High  
cufflinks 4.934        
cufflinks 0.89       Low
cufflinks 5.596        
cufflinks 8.432     High  
cufflinks 8.889     High  

0 Strain