Gene : Glyma.06G078500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11599:SF4 - PROTEASOME SUBUNIT BETA TYPE Genomic Order:  785
Name:  ? Glyma.06G078500 Secondary Identifier:  ? PAC:30553192
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G078500 0.5kb upstream 0.5kb upstream 4160 true Chr06: 6073111-6077270 Glycine max
Glyma.06G078500 0.5kb upstream 0.5kb upstream 500 false Chr06: 6073111-6073610 Glycine max
Glyma.06G078500 0.5kb downstream 0.5kb downstream 4160 true Chr06: 6073611-6077770 Glycine max
Glyma.06G078500 0.5kb downstream 0.5kb downstream 500 false Chr06: 6077271-6077770 Glycine max
Glyma.06G078500 1.0kb upstream 1.0kb upstream 4660 true Chr06: 6072611-6077270 Glycine max
Glyma.06G078500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 6072611-6073610 Glycine max
Glyma.06G078500 1.0kb downstream 1.0kb downstream 4660 true Chr06: 6073611-6078270 Glycine max
Glyma.06G078500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 6077271-6078270 Glycine max
Glyma.06G078500 2.0kb upstream 2.0kb upstream 5660 true Chr06: 6071611-6077270 Glycine max
Glyma.06G078500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 6071611-6073610 Glycine max
Glyma.06G078500 2.0kb downstream 2.0kb downstream 5660 true Chr06: 6073611-6079270 Glycine max
Glyma.06G078500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 6077271-6079270 Glycine max
Glyma.06G078500 5.0kb upstream 5.0kb upstream 8660 true Chr06: 6068611-6077270 Glycine max
Glyma.06G078500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 6068611-6073610 Glycine max
Glyma.06G078500 5.0kb downstream 5.0kb downstream 8660 true Chr06: 6073611-6082270 Glycine max
Glyma.06G078500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 6077271-6082270 Glycine max
Glyma.06G078500 10.0kb upstream 10.0kb upstream 13660 true Chr06: 6063611-6077270 Glycine max
Glyma.06G078500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 6063611-6073610 Glycine max
Glyma.06G078500 10.0kb downstream 10.0kb downstream 13660 true Chr06: 6073611-6087270 Glycine max
Glyma.06G078500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 6077271-6087270 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308498 5265 Fabidae View MSA
124072118 5270 Rosid View MSA
123739837 5271 Pentapetalae View MSA
122787112 5272 Eudicot View MSA
122042540 5273 Angiosperm View MSA
121348107 5274 Embryophyte View MSA
123423963 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 68.1238 0.0 187.405 High  
cufflinks 81.5729 0.0 227.947 High  
cufflinks 82.1125 0.0 229.977 High  
cufflinks 62.4705 0.0 170.669 High Low
cufflinks 109.012 0.0 316.376 High  
cufflinks 165.781 0.0 512.766 High High
cufflinks 61.2627 0.0 167.086 High Low
cufflinks 120.623 0.0 354.813 High  
cufflinks 89.0454 0.0 251.824 High  
cufflinks 28.401     High High
cufflinks 18.714     High  
cufflinks 15.368     High Low
cufflinks 34.045     High High
cufflinks 37.258     High High
cufflinks 14.703     High Low
cufflinks 22.819     High  
cufflinks 16.897     High  
cufflinks 18.44     High  
cufflinks 20.621     High  
cufflinks 21.542     High  
cufflinks 21.745     High  
cufflinks 21.86     High  
cufflinks 20.456     High  
cufflinks 18.824     High  
cufflinks 20.607     High  
cufflinks 20.418     High  

0 Strain