Gene : Glyma.06G080800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR33168:SF12 - EXPRESSED PROTEIN Genomic Order:  808
Name:  ? Glyma.06G080800 Secondary Identifier:  ? PAC:30550961
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G080800 0.5kb upstream 0.5kb upstream 848 true Chr06: 6195337-6196184 Glycine max
Glyma.06G080800 0.5kb upstream 0.5kb upstream 500 false Chr06: 6195685-6196184 Glycine max
Glyma.06G080800 0.5kb downstream 0.5kb downstream 848 true Chr06: 6194837-6195684 Glycine max
Glyma.06G080800 0.5kb downstream 0.5kb downstream 500 false Chr06: 6194837-6195336 Glycine max
Glyma.06G080800 1.0kb upstream 1.0kb upstream 1348 true Chr06: 6195337-6196684 Glycine max
Glyma.06G080800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 6195685-6196684 Glycine max
Glyma.06G080800 1.0kb downstream 1.0kb downstream 1348 true Chr06: 6194337-6195684 Glycine max
Glyma.06G080800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 6194337-6195336 Glycine max
Glyma.06G080800 2.0kb upstream 2.0kb upstream 2348 true Chr06: 6195337-6197684 Glycine max
Glyma.06G080800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 6195685-6197684 Glycine max
Glyma.06G080800 2.0kb downstream 2.0kb downstream 2348 true Chr06: 6193337-6195684 Glycine max
Glyma.06G080800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 6193337-6195336 Glycine max
Glyma.06G080800 5.0kb upstream 5.0kb upstream 5348 true Chr06: 6195337-6200684 Glycine max
Glyma.06G080800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 6195685-6200684 Glycine max
Glyma.06G080800 5.0kb downstream 5.0kb downstream 5348 true Chr06: 6190337-6195684 Glycine max
Glyma.06G080800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 6190337-6195336 Glycine max
Glyma.06G080800 10.0kb upstream 10.0kb upstream 10348 true Chr06: 6195337-6205684 Glycine max
Glyma.06G080800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 6195685-6205684 Glycine max
Glyma.06G080800 10.0kb downstream 10.0kb downstream 10348 true Chr06: 6185337-6195684 Glycine max
Glyma.06G080800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 6185337-6195336 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311154 5265 Fabidae View MSA
124074176 5270 Rosid View MSA
123744638 5271 Pentapetalae View MSA
122795740 5272 Eudicot View MSA
122048464 5273 Angiosperm View MSA
121310979 5274 Embryophyte View MSA
123348342 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.355914 0.0 1.45365   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.159479 0.0 0.688619 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.165331 0.0 0.712064 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.045     Low Low
cufflinks 1.559        
cufflinks 0.087     Low  
cufflinks 0.089     Low  
cufflinks 0.384        
cufflinks 0.279        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.085        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.09       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.839        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.222       High

0 Strain