Gene : Glyma.06G071400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22595//PTHR22595:SF47 - CHITINASE-RELATED Genomic Order:  714
Name:  ? Glyma.06G071400 Secondary Identifier:  ? PAC:30554276
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G071400 0.5kb upstream 0.5kb upstream 2690 true Chr06: 5460379-5463068 Glycine max
Glyma.06G071400 0.5kb upstream 0.5kb upstream 500 false Chr06: 5460379-5460878 Glycine max
Glyma.06G071400 0.5kb downstream 0.5kb downstream 2690 true Chr06: 5460879-5463568 Glycine max
Glyma.06G071400 0.5kb downstream 0.5kb downstream 500 false Chr06: 5463069-5463568 Glycine max
Glyma.06G071400 1.0kb upstream 1.0kb upstream 3190 true Chr06: 5459879-5463068 Glycine max
Glyma.06G071400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 5459879-5460878 Glycine max
Glyma.06G071400 1.0kb downstream 1.0kb downstream 3190 true Chr06: 5460879-5464068 Glycine max
Glyma.06G071400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 5463069-5464068 Glycine max
Glyma.06G071400 2.0kb upstream 2.0kb upstream 4190 true Chr06: 5458879-5463068 Glycine max
Glyma.06G071400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 5458879-5460878 Glycine max
Glyma.06G071400 2.0kb downstream 2.0kb downstream 4190 true Chr06: 5460879-5465068 Glycine max
Glyma.06G071400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 5463069-5465068 Glycine max
Glyma.06G071400 5.0kb upstream 5.0kb upstream 7190 true Chr06: 5455879-5463068 Glycine max
Glyma.06G071400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 5455879-5460878 Glycine max
Glyma.06G071400 5.0kb downstream 5.0kb downstream 7190 true Chr06: 5460879-5468068 Glycine max
Glyma.06G071400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 5463069-5468068 Glycine max
Glyma.06G071400 10.0kb upstream 10.0kb upstream 12190 true Chr06: 5450879-5463068 Glycine max
Glyma.06G071400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 5450879-5460878 Glycine max
Glyma.06G071400 10.0kb downstream 10.0kb downstream 12190 true Chr06: 5460879-5473068 Glycine max
Glyma.06G071400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 5463069-5473068 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302197 5265 Fabidae View MSA
124070009 5270 Rosid View MSA
123742328 5271 Pentapetalae View MSA
122795225 5272 Eudicot View MSA
122051117 5273 Angiosperm View MSA
121350536 5274 Embryophyte View MSA
123381778 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.4244 0.0 6.77358    
cufflinks 1.23775 0.0 6.10798    
cufflinks 15.8381 0.0 56.3216    
cufflinks 1.03882 0.0 5.1607   Low
cufflinks 10.0009 0.0 40.2328    
cufflinks 89.1481 0.0 276.193 High High
cufflinks 1.67975 0.0 10.1459    
cufflinks 2.62773 0.0 11.5761    
cufflinks 10.0213 0.0 39.6901    
cufflinks 0.11        
cufflinks 2.457       High
cufflinks 0.652        
cufflinks 1.567       High
cufflinks 1.365        
cufflinks 0.132        
cufflinks 0.037     Low Low
cufflinks 0.653        
cufflinks 0.148        
cufflinks 0.135        
cufflinks 0.043     Low Low
cufflinks 1.493       High
cufflinks 0.042     Low Low
cufflinks 0.059     Low  
cufflinks 2.198       High
cufflinks 0.038     Low Low
cufflinks 1.786       High

0 Strain