Gene : Glyma.06G073600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31407:SF7 - PSBP DOMAIN-CONTAINING PROTEIN 5, CHLOROPLASTIC Genomic Order:  736
Name:  ? Glyma.06G073600 Secondary Identifier:  ? PAC:30550554
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PHOTOALL-PWY Glycine max pathologic  
Gmax PWY-101 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G073600 0.5kb upstream 0.5kb upstream 5499 true Chr06: 5663629-5669127 Glycine max
Glyma.06G073600 0.5kb upstream 0.5kb upstream 500 false Chr06: 5663629-5664128 Glycine max
Glyma.06G073600 0.5kb downstream 0.5kb downstream 5499 true Chr06: 5664129-5669627 Glycine max
Glyma.06G073600 0.5kb downstream 0.5kb downstream 500 false Chr06: 5669128-5669627 Glycine max
Glyma.06G073600 1.0kb upstream 1.0kb upstream 5999 true Chr06: 5663129-5669127 Glycine max
Glyma.06G073600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 5663129-5664128 Glycine max
Glyma.06G073600 1.0kb downstream 1.0kb downstream 5999 true Chr06: 5664129-5670127 Glycine max
Glyma.06G073600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 5669128-5670127 Glycine max
Glyma.06G073600 2.0kb upstream 2.0kb upstream 6999 true Chr06: 5662129-5669127 Glycine max
Glyma.06G073600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 5662129-5664128 Glycine max
Glyma.06G073600 2.0kb downstream 2.0kb downstream 6999 true Chr06: 5664129-5671127 Glycine max
Glyma.06G073600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 5669128-5671127 Glycine max
Glyma.06G073600 5.0kb upstream 5.0kb upstream 9999 true Chr06: 5659129-5669127 Glycine max
Glyma.06G073600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 5659129-5664128 Glycine max
Glyma.06G073600 5.0kb downstream 5.0kb downstream 9999 true Chr06: 5664129-5674127 Glycine max
Glyma.06G073600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 5669128-5674127 Glycine max
Glyma.06G073600 10.0kb upstream 10.0kb upstream 14999 true Chr06: 5654129-5669127 Glycine max
Glyma.06G073600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 5654129-5664128 Glycine max
Glyma.06G073600 10.0kb downstream 10.0kb downstream 14999 true Chr06: 5664129-5679127 Glycine max
Glyma.06G073600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 5669128-5679127 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302325 5265 Fabidae View MSA
124062486 5270 Rosid View MSA
123736940 5271 Pentapetalae View MSA
122792817 5272 Eudicot View MSA
122045870 5273 Angiosperm View MSA
121347202 5274 Embryophyte View MSA
123425599 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.4173 0.0 32.3028    
cufflinks 18.964 0.0 51.3679   High
cufflinks 4.57198 0.0 14.5463    
cufflinks 9.2507 0.0 26.7664    
cufflinks 6.19284 0.0 18.9558    
cufflinks 3.63069 0.0 11.9457   Low
cufflinks 5.08552 0.0 16.0472    
cufflinks 8.30913 0.0 24.3528    
cufflinks 3.7621 0.0 12.3199   Low
cufflinks 2.484        
cufflinks 0.097       Low
cufflinks 1.889        
cufflinks 0.81        
cufflinks 0.957        
cufflinks 0.192       Low
cufflinks 10.183     High High
cufflinks 0.331        
cufflinks 3.244        
cufflinks 3.281        
cufflinks 11.627     High High
cufflinks 0.129       Low
cufflinks 9.191     High High
cufflinks 11.552     High High
cufflinks 0.08       Low
cufflinks 10.472     High High
cufflinks 0.235        

0 Strain