Gene : Glyma.06G075200 G. max Wm82.a2.v1
Defline:  (1 of 30) PF06749 - Protein of unknown function (DUF1218) (DUF1218) Genomic Order:  752
Name:  ? Glyma.06G075200 Secondary Identifier:  ? PAC:30553429
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G075200 0.5kb upstream 0.5kb upstream 4873 true Chr06: 5816393-5821265 Glycine max
Glyma.06G075200 0.5kb upstream 0.5kb upstream 500 false Chr06: 5816393-5816892 Glycine max
Glyma.06G075200 0.5kb downstream 0.5kb downstream 4873 true Chr06: 5816893-5821765 Glycine max
Glyma.06G075200 0.5kb downstream 0.5kb downstream 500 false Chr06: 5821266-5821765 Glycine max
Glyma.06G075200 1.0kb upstream 1.0kb upstream 5373 true Chr06: 5815893-5821265 Glycine max
Glyma.06G075200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 5815893-5816892 Glycine max
Glyma.06G075200 1.0kb downstream 1.0kb downstream 5373 true Chr06: 5816893-5822265 Glycine max
Glyma.06G075200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 5821266-5822265 Glycine max
Glyma.06G075200 2.0kb upstream 2.0kb upstream 6373 true Chr06: 5814893-5821265 Glycine max
Glyma.06G075200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 5814893-5816892 Glycine max
Glyma.06G075200 2.0kb downstream 2.0kb downstream 6373 true Chr06: 5816893-5823265 Glycine max
Glyma.06G075200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 5821266-5823265 Glycine max
Glyma.06G075200 5.0kb upstream 5.0kb upstream 9373 true Chr06: 5811893-5821265 Glycine max
Glyma.06G075200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 5811893-5816892 Glycine max
Glyma.06G075200 5.0kb downstream 5.0kb downstream 9373 true Chr06: 5816893-5826265 Glycine max
Glyma.06G075200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 5821266-5826265 Glycine max
Glyma.06G075200 10.0kb upstream 10.0kb upstream 14373 true Chr06: 5806893-5821265 Glycine max
Glyma.06G075200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 5806893-5816892 Glycine max
Glyma.06G075200 10.0kb downstream 10.0kb downstream 14373 true Chr06: 5816893-5831265 Glycine max
Glyma.06G075200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 5821266-5831265 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041222 5273 Angiosperm View MSA
122299842 5265 Fabidae View MSA
124061331 5270 Rosid View MSA
123737344 5271 Pentapetalae View MSA
122792572 5272 Eudicot View MSA
121350312 5274 Embryophyte View MSA
123381673 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.1911 0.0 49.9952    
cufflinks 3.43398 0.0 11.6248   Low
cufflinks 10.8817 0.0 31.4477    
cufflinks 15.8574 0.0 44.0115    
cufflinks 5.16944 0.0 16.5904    
cufflinks 38.7382 0.0 103.349 High High
cufflinks 8.11489 0.0 24.457    
cufflinks 10.9507 0.0 31.6438    
cufflinks 3.50683 0.0 11.8318   Low
cufflinks 2.997       High
cufflinks 1.657        
cufflinks 2.294        
cufflinks 1.794        
cufflinks 1.695        
cufflinks 0.161       Low
cufflinks 1.597        
cufflinks 0.616       Low
cufflinks 2.336        
cufflinks 1.006        
cufflinks 0.881        
cufflinks 2.202        
cufflinks 2.063        
cufflinks 1.236        
cufflinks 3.776       High
cufflinks 0.753        
cufflinks 1.389        

0 Strain