Gene : Glyma.06G075500 G. max Wm82.a2.v1
Defline:  (1 of 4) KOG1863 - Ubiquitin carboxyl-terminal hydrolase Genomic Order:  755
Name:  ? Glyma.06G075500 Secondary Identifier:  ? PAC:30553889
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G075500 0.5kb upstream 0.5kb upstream 12589 true Chr06: 5835169-5847757 Glycine max
Glyma.06G075500 0.5kb upstream 0.5kb upstream 500 false Chr06: 5847258-5847757 Glycine max
Glyma.06G075500 0.5kb downstream 0.5kb downstream 12589 true Chr06: 5834669-5847257 Glycine max
Glyma.06G075500 0.5kb downstream 0.5kb downstream 500 false Chr06: 5834669-5835168 Glycine max
Glyma.06G075500 1.0kb upstream 1.0kb upstream 13089 true Chr06: 5835169-5848257 Glycine max
Glyma.06G075500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 5847258-5848257 Glycine max
Glyma.06G075500 1.0kb downstream 1.0kb downstream 13089 true Chr06: 5834169-5847257 Glycine max
Glyma.06G075500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 5834169-5835168 Glycine max
Glyma.06G075500 2.0kb upstream 2.0kb upstream 14089 true Chr06: 5835169-5849257 Glycine max
Glyma.06G075500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 5847258-5849257 Glycine max
Glyma.06G075500 2.0kb downstream 2.0kb downstream 14089 true Chr06: 5833169-5847257 Glycine max
Glyma.06G075500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 5833169-5835168 Glycine max
Glyma.06G075500 5.0kb upstream 5.0kb upstream 17089 true Chr06: 5835169-5852257 Glycine max
Glyma.06G075500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 5847258-5852257 Glycine max
Glyma.06G075500 5.0kb downstream 5.0kb downstream 17089 true Chr06: 5830169-5847257 Glycine max
Glyma.06G075500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 5830169-5835168 Glycine max
Glyma.06G075500 10.0kb upstream 10.0kb upstream 22089 true Chr06: 5835169-5857257 Glycine max
Glyma.06G075500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 5847258-5857257 Glycine max
Glyma.06G075500 10.0kb downstream 10.0kb downstream 22089 true Chr06: 5825169-5847257 Glycine max
Glyma.06G075500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 5825169-5835168 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309346 5265 Fabidae View MSA
124061105 5270 Rosid View MSA
123737651 5271 Pentapetalae View MSA
122791193 5272 Eudicot View MSA
122043849 5273 Angiosperm View MSA
121347383 5274 Embryophyte View MSA
123427406 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.42249 0.0 19.9214    
cufflinks 6.41673 0.0 29.4677    
cufflinks 6.55962 0.0 27.1704   High
cufflinks 5.37155 0.0 22.6372    
cufflinks 4.57227 0.0 19.7362    
cufflinks 3.40937 0.0 12.6923   Low
cufflinks 7.04239 0.0 26.8393   High
cufflinks 4.61511 0.0 22.9163    
cufflinks 4.4975 0.0 19.4018    
cufflinks 0.227       Low
cufflinks 0.274        
cufflinks 0.426        
cufflinks 0.322        
cufflinks 0.348        
cufflinks 0.456        
cufflinks 0.43        
cufflinks 0.195       Low
cufflinks 0.449        
cufflinks 0.518       High
cufflinks 0.475        
cufflinks 0.271        
cufflinks 0.46        
cufflinks 0.4        
cufflinks 0.282        
cufflinks 0.45        
cufflinks 0.247       Low

0 Strain