Gene : Glyma.06G109500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10972:SF100 - OXYSTEROL-BINDING PROTEIN HOMOLOG 3 Genomic Order:  1095
Name:  ? Glyma.06G109500 Secondary Identifier:  ? PAC:30552009
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G109500 0.5kb upstream 0.5kb upstream 6472 true Chr06: 8847281-8853752 Glycine max
Glyma.06G109500 0.5kb upstream 0.5kb upstream 500 false Chr06: 8853253-8853752 Glycine max
Glyma.06G109500 0.5kb downstream 0.5kb downstream 6472 true Chr06: 8846781-8853252 Glycine max
Glyma.06G109500 0.5kb downstream 0.5kb downstream 500 false Chr06: 8846781-8847280 Glycine max
Glyma.06G109500 1.0kb upstream 1.0kb upstream 6972 true Chr06: 8847281-8854252 Glycine max
Glyma.06G109500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 8853253-8854252 Glycine max
Glyma.06G109500 1.0kb downstream 1.0kb downstream 6972 true Chr06: 8846281-8853252 Glycine max
Glyma.06G109500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 8846281-8847280 Glycine max
Glyma.06G109500 2.0kb upstream 2.0kb upstream 7972 true Chr06: 8847281-8855252 Glycine max
Glyma.06G109500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 8853253-8855252 Glycine max
Glyma.06G109500 2.0kb downstream 2.0kb downstream 7972 true Chr06: 8845281-8853252 Glycine max
Glyma.06G109500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 8845281-8847280 Glycine max
Glyma.06G109500 5.0kb upstream 5.0kb upstream 10972 true Chr06: 8847281-8858252 Glycine max
Glyma.06G109500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 8853253-8858252 Glycine max
Glyma.06G109500 5.0kb downstream 5.0kb downstream 10972 true Chr06: 8842281-8853252 Glycine max
Glyma.06G109500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 8842281-8847280 Glycine max
Glyma.06G109500 10.0kb upstream 10.0kb upstream 15972 true Chr06: 8847281-8863252 Glycine max
Glyma.06G109500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 8853253-8863252 Glycine max
Glyma.06G109500 10.0kb downstream 10.0kb downstream 15972 true Chr06: 8837281-8853252 Glycine max
Glyma.06G109500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 8837281-8847280 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041393 5273 Angiosperm View MSA
122302248 5265 Fabidae View MSA
124062971 5270 Rosid View MSA
123750665 5271 Pentapetalae View MSA
122795598 5272 Eudicot View MSA
121348669 5274 Embryophyte View MSA
123428535 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.02785 0.0 21.1123    
cufflinks 1.69531 0.0 7.10698   Low
cufflinks 28.0611 0.0 109.732 High High
cufflinks 15.4737 0.0 54.3044    
cufflinks 7.15787 0.0 24.6993    
cufflinks 32.6899 0.0 115.959 High High
cufflinks 4.07811 0.0 15.1516    
cufflinks 13.2885 0.0 46.0001    
cufflinks 7.03337 0.0 24.3054    
cufflinks 10.361     High High
cufflinks 2.776        
cufflinks 8.769     High High
cufflinks 3.576        
cufflinks 1.883        
cufflinks 7.685     High High
cufflinks 1.044       Low
cufflinks 4.679        
cufflinks 3.174        
cufflinks 0.985       Low
cufflinks 0.983       Low
cufflinks 2.043        
cufflinks 1.313        
cufflinks 2.306        
cufflinks 3.049        
cufflinks 0.957       Low
cufflinks 2.525        

0 Strain