Gene : Glyma.06G113700 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11830 - 40S RIBOSOMAL PROTEIN S3A Genomic Order:  1137
Name:  ? Glyma.06G113700 Secondary Identifier:  ? PAC:30551622
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G113700 0.5kb upstream 0.5kb upstream 2805 true Chr06: 9224913-9227717 Glycine max
Glyma.06G113700 0.5kb upstream 0.5kb upstream 500 false Chr06: 9227218-9227717 Glycine max
Glyma.06G113700 0.5kb downstream 0.5kb downstream 2805 true Chr06: 9224413-9227217 Glycine max
Glyma.06G113700 0.5kb downstream 0.5kb downstream 500 false Chr06: 9224413-9224912 Glycine max
Glyma.06G113700 1.0kb upstream 1.0kb upstream 3305 true Chr06: 9224913-9228217 Glycine max
Glyma.06G113700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 9227218-9228217 Glycine max
Glyma.06G113700 1.0kb downstream 1.0kb downstream 3305 true Chr06: 9223913-9227217 Glycine max
Glyma.06G113700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 9223913-9224912 Glycine max
Glyma.06G113700 2.0kb upstream 2.0kb upstream 4305 true Chr06: 9224913-9229217 Glycine max
Glyma.06G113700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 9227218-9229217 Glycine max
Glyma.06G113700 2.0kb downstream 2.0kb downstream 4305 true Chr06: 9222913-9227217 Glycine max
Glyma.06G113700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 9222913-9224912 Glycine max
Glyma.06G113700 5.0kb upstream 5.0kb upstream 7305 true Chr06: 9224913-9232217 Glycine max
Glyma.06G113700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 9227218-9232217 Glycine max
Glyma.06G113700 5.0kb downstream 5.0kb downstream 7305 true Chr06: 9219913-9227217 Glycine max
Glyma.06G113700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 9219913-9224912 Glycine max
Glyma.06G113700 10.0kb upstream 10.0kb upstream 12305 true Chr06: 9224913-9237217 Glycine max
Glyma.06G113700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 9227218-9237217 Glycine max
Glyma.06G113700 10.0kb downstream 10.0kb downstream 12305 true Chr06: 9214913-9227217 Glycine max
Glyma.06G113700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 9214913-9224912 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255405 5265 Fabidae View MSA
124066895 5270 Rosid View MSA
123743383 5271 Pentapetalae View MSA
122787922 5272 Eudicot View MSA
122049456 5273 Angiosperm View MSA
121347467 5274 Embryophyte View MSA
123424177 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0285496 0.0 0.135649 Low Low
cufflinks 0.212036 0.0 0.831741 Low  
cufflinks 0.41417 0.0 2.80313   High
cufflinks 0.0704487 0.0 0.299878 Low  
cufflinks 0.09239 0.0 0.382893 Low  
cufflinks 0.106327 0.0 0.436396 Low  
cufflinks 0.351939 0.0 1.76144   High
cufflinks 0.0549311 0.0 0.234845 Low  
cufflinks 0.157169 0.0 0.626585 Low  
cufflinks 0.192        
cufflinks 0.014     Low Low
cufflinks 0.078     Low  
cufflinks 0.278       High
cufflinks 0.396       High
cufflinks 0.045     Low  
cufflinks 0.062     Low  
cufflinks 0.035     Low  
cufflinks 0.291       High
cufflinks 0.205        
cufflinks 0.07     Low  
cufflinks 0.033     Low  
cufflinks 0.046     Low  
cufflinks 0.284       High
cufflinks 0.033     Low  
cufflinks 0.083     Low  
cufflinks 0.078        

0 Strain