Gene : Glyma.06G115400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR23421:SF73 - BETA-GALACTOSIDASE 6 Genomic Order:  1154
Name:  ? Glyma.06G115400 Secondary Identifier:  ? PAC:30553856
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G115400 0.5kb upstream 0.5kb upstream 9352 true Chr06: 9391722-9401073 Glycine max
Glyma.06G115400 0.5kb upstream 0.5kb upstream 500 false Chr06: 9391722-9392221 Glycine max
Glyma.06G115400 0.5kb downstream 0.5kb downstream 9352 true Chr06: 9392222-9401573 Glycine max
Glyma.06G115400 0.5kb downstream 0.5kb downstream 500 false Chr06: 9401074-9401573 Glycine max
Glyma.06G115400 1.0kb upstream 1.0kb upstream 9852 true Chr06: 9391222-9401073 Glycine max
Glyma.06G115400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 9391222-9392221 Glycine max
Glyma.06G115400 1.0kb downstream 1.0kb downstream 9852 true Chr06: 9392222-9402073 Glycine max
Glyma.06G115400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 9401074-9402073 Glycine max
Glyma.06G115400 2.0kb upstream 2.0kb upstream 10852 true Chr06: 9390222-9401073 Glycine max
Glyma.06G115400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 9390222-9392221 Glycine max
Glyma.06G115400 2.0kb downstream 2.0kb downstream 10852 true Chr06: 9392222-9403073 Glycine max
Glyma.06G115400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 9401074-9403073 Glycine max
Glyma.06G115400 5.0kb upstream 5.0kb upstream 13852 true Chr06: 9387222-9401073 Glycine max
Glyma.06G115400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 9387222-9392221 Glycine max
Glyma.06G115400 5.0kb downstream 5.0kb downstream 13852 true Chr06: 9392222-9406073 Glycine max
Glyma.06G115400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 9401074-9406073 Glycine max
Glyma.06G115400 10.0kb upstream 10.0kb upstream 18852 true Chr06: 9382222-9401073 Glycine max
Glyma.06G115400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 9382222-9392221 Glycine max
Glyma.06G115400 10.0kb downstream 10.0kb downstream 18852 true Chr06: 9392222-9411073 Glycine max
Glyma.06G115400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 9401074-9411073 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308981 5265 Fabidae View MSA
124065839 5270 Rosid View MSA
123737089 5271 Pentapetalae View MSA
122791756 5272 Eudicot View MSA
122045958 5273 Angiosperm View MSA
121310530 5274 Embryophyte View MSA
123428653 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.245458 0.0 1.21062    
cufflinks 2.63447 0.0 8.01429   High
cufflinks 0.898384 0.0 4.80164    
cufflinks 0.575538 0.0 2.59642    
cufflinks 0.054387 0.0 0.218292 Low Low
cufflinks 0.422455 0.0 1.94446    
cufflinks 0.344433 0.0 1.65861    
cufflinks 0.800662 0.0 4.68804    
cufflinks 0.294322 0.0 1.93323    
cufflinks 0.114        
cufflinks 0.023     Low  
cufflinks 0.366       High
cufflinks 0.306       High
cufflinks 0.174        
cufflinks 0.027     Low  
cufflinks 0.072     Low  
cufflinks 0.023     Low  
cufflinks 0.085     Low  
cufflinks 0.918       High
cufflinks 0.004     Low Low
cufflinks 0.029     Low  
cufflinks 0.009     Low Low
cufflinks 0.037     Low  
cufflinks 0.029     Low  
cufflinks 0.014     Low  
cufflinks 0.044     Low  

0 Strain