Gene : Glyma.06G104200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31132:SF2 - EXPRESSED PROTEIN Genomic Order:  1042
Name:  ? Glyma.06G104200 Secondary Identifier:  ? PAC:30549435
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G104200 0.5kb upstream 0.5kb upstream 3686 true Chr06: 8293503-8297188 Glycine max
Glyma.06G104200 0.5kb upstream 0.5kb upstream 500 false Chr06: 8296689-8297188 Glycine max
Glyma.06G104200 0.5kb downstream 0.5kb downstream 3686 true Chr06: 8293003-8296688 Glycine max
Glyma.06G104200 0.5kb downstream 0.5kb downstream 500 false Chr06: 8293003-8293502 Glycine max
Glyma.06G104200 1.0kb upstream 1.0kb upstream 4186 true Chr06: 8293503-8297688 Glycine max
Glyma.06G104200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 8296689-8297688 Glycine max
Glyma.06G104200 1.0kb downstream 1.0kb downstream 4186 true Chr06: 8292503-8296688 Glycine max
Glyma.06G104200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 8292503-8293502 Glycine max
Glyma.06G104200 2.0kb upstream 2.0kb upstream 5186 true Chr06: 8293503-8298688 Glycine max
Glyma.06G104200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 8296689-8298688 Glycine max
Glyma.06G104200 2.0kb downstream 2.0kb downstream 5186 true Chr06: 8291503-8296688 Glycine max
Glyma.06G104200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 8291503-8293502 Glycine max
Glyma.06G104200 5.0kb upstream 5.0kb upstream 8186 true Chr06: 8293503-8301688 Glycine max
Glyma.06G104200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 8296689-8301688 Glycine max
Glyma.06G104200 5.0kb downstream 5.0kb downstream 8186 true Chr06: 8288503-8296688 Glycine max
Glyma.06G104200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 8288503-8293502 Glycine max
Glyma.06G104200 10.0kb upstream 10.0kb upstream 13186 true Chr06: 8293503-8306688 Glycine max
Glyma.06G104200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 8296689-8306688 Glycine max
Glyma.06G104200 10.0kb downstream 10.0kb downstream 13186 true Chr06: 8283503-8296688 Glycine max
Glyma.06G104200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 8283503-8293502 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299104 5265 Fabidae View MSA
124064048 5270 Rosid View MSA
123745943 5271 Pentapetalae View MSA
122791019 5272 Eudicot View MSA
122045269 5273 Angiosperm View MSA
121344429 5274 Embryophyte View MSA
123426064 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.6463 0.0 61.1983   Low
cufflinks 49.7277 0.0 237.15 High  
cufflinks 23.5628 0.0 110.156 High  
cufflinks 41.8099 0.0 204.72 High  
cufflinks 37.4464 0.0 169.53 High  
cufflinks 32.5991 0.0 145.448 High  
cufflinks 40.375 0.0 195.04 High  
cufflinks 38.4323 0.0 176.823 High  
cufflinks 40.8998 0.0 199.9 High  
cufflinks 5.211        
cufflinks 3.094        
cufflinks 3.291        
cufflinks 4.95        
cufflinks 6.135        
cufflinks 2.348       Low
cufflinks 6.652        
cufflinks 2.259       Low
cufflinks 5.994        
cufflinks 3.878        
cufflinks 8.001     High High
cufflinks 4.22        
cufflinks 7.408     High High
cufflinks 5.928        
cufflinks 2.819       Low
cufflinks 7.32     High High
cufflinks 2.342       Low

0 Strain