Gene : Glyma.06G104600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR22904//PTHR22904:SF360 - TPR REPEAT CONTAINING PROTEIN Genomic Order:  1046
Name:  ? Glyma.06G104600 Secondary Identifier:  ? PAC:30550774
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G104600 0.5kb upstream 0.5kb upstream 4595 true Chr06: 8335242-8339836 Glycine max
Glyma.06G104600 0.5kb upstream 0.5kb upstream 500 false Chr06: 8335242-8335741 Glycine max
Glyma.06G104600 0.5kb downstream 0.5kb downstream 4595 true Chr06: 8335742-8340336 Glycine max
Glyma.06G104600 0.5kb downstream 0.5kb downstream 500 false Chr06: 8339837-8340336 Glycine max
Glyma.06G104600 1.0kb upstream 1.0kb upstream 5095 true Chr06: 8334742-8339836 Glycine max
Glyma.06G104600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 8334742-8335741 Glycine max
Glyma.06G104600 1.0kb downstream 1.0kb downstream 5095 true Chr06: 8335742-8340836 Glycine max
Glyma.06G104600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 8339837-8340836 Glycine max
Glyma.06G104600 2.0kb upstream 2.0kb upstream 6095 true Chr06: 8333742-8339836 Glycine max
Glyma.06G104600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 8333742-8335741 Glycine max
Glyma.06G104600 2.0kb downstream 2.0kb downstream 6095 true Chr06: 8335742-8341836 Glycine max
Glyma.06G104600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 8339837-8341836 Glycine max
Glyma.06G104600 5.0kb upstream 5.0kb upstream 9095 true Chr06: 8330742-8339836 Glycine max
Glyma.06G104600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 8330742-8335741 Glycine max
Glyma.06G104600 5.0kb downstream 5.0kb downstream 9095 true Chr06: 8335742-8344836 Glycine max
Glyma.06G104600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 8339837-8344836 Glycine max
Glyma.06G104600 10.0kb upstream 10.0kb upstream 14095 true Chr06: 8325742-8339836 Glycine max
Glyma.06G104600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 8325742-8335741 Glycine max
Glyma.06G104600 10.0kb downstream 10.0kb downstream 14095 true Chr06: 8335742-8349836 Glycine max
Glyma.06G104600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 8339837-8349836 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311538 5265 Fabidae View MSA
124069860 5270 Rosid View MSA
123742749 5271 Pentapetalae View MSA
122798057 5272 Eudicot View MSA
122047040 5273 Angiosperm View MSA
121310683 5274 Embryophyte View MSA
123348108 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.1732 0.0 58.4721   High
cufflinks 0.276951 0.0 1.02087   Low
cufflinks 5.29135 0.0 14.3477    
cufflinks 10.3971 0.0 27.7534    
cufflinks 3.59196 0.0 10.0552    
cufflinks 22.5321 0.0 62.5767   High
cufflinks 0.835795 0.0 2.83509   Low
cufflinks 8.2226 0.0 21.9557    
cufflinks 7.52769 0.0 20.1371    
cufflinks 7.644     High  
cufflinks 12.474     High  
cufflinks 5.118        
cufflinks 18.594     High  
cufflinks 1.218        
cufflinks 104.98     High High
cufflinks 0.292        
cufflinks 56.091     High High
cufflinks 0.652        
cufflinks 0.103       Low
cufflinks 0.214       Low
cufflinks 18.605     High  
cufflinks 0.324        
cufflinks 0.176       Low
cufflinks 9.772     High  
cufflinks 0.226       Low
cufflinks 40.187     High High

0 Strain