Gene : Glyma.06G104800 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR10788:SF25 - TREHALOSE-PHOSPHATE PHOSPHATASE D-RELATED Genomic Order:  1048
Name:  ? Glyma.06G104800 Secondary Identifier:  ? PAC:30553762
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G104800 0.5kb upstream 0.5kb upstream 3676 true Chr06: 8372403-8376078 Glycine max
Glyma.06G104800 0.5kb upstream 0.5kb upstream 500 false Chr06: 8372403-8372902 Glycine max
Glyma.06G104800 0.5kb downstream 0.5kb downstream 3676 true Chr06: 8372903-8376578 Glycine max
Glyma.06G104800 0.5kb downstream 0.5kb downstream 500 false Chr06: 8376079-8376578 Glycine max
Glyma.06G104800 1.0kb upstream 1.0kb upstream 4176 true Chr06: 8371903-8376078 Glycine max
Glyma.06G104800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 8371903-8372902 Glycine max
Glyma.06G104800 1.0kb downstream 1.0kb downstream 4176 true Chr06: 8372903-8377078 Glycine max
Glyma.06G104800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 8376079-8377078 Glycine max
Glyma.06G104800 2.0kb upstream 2.0kb upstream 5176 true Chr06: 8370903-8376078 Glycine max
Glyma.06G104800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 8370903-8372902 Glycine max
Glyma.06G104800 2.0kb downstream 2.0kb downstream 5176 true Chr06: 8372903-8378078 Glycine max
Glyma.06G104800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 8376079-8378078 Glycine max
Glyma.06G104800 5.0kb upstream 5.0kb upstream 8176 true Chr06: 8367903-8376078 Glycine max
Glyma.06G104800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 8367903-8372902 Glycine max
Glyma.06G104800 5.0kb downstream 5.0kb downstream 8176 true Chr06: 8372903-8381078 Glycine max
Glyma.06G104800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 8376079-8381078 Glycine max
Glyma.06G104800 10.0kb upstream 10.0kb upstream 13176 true Chr06: 8362903-8376078 Glycine max
Glyma.06G104800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 8362903-8372902 Glycine max
Glyma.06G104800 10.0kb downstream 10.0kb downstream 13176 true Chr06: 8372903-8386078 Glycine max
Glyma.06G104800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 8376079-8386078 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310219 5265 Fabidae View MSA
124069564 5270 Rosid View MSA
123746966 5271 Pentapetalae View MSA
122786046 5272 Eudicot View MSA
122042129 5273 Angiosperm View MSA
121351669 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.54739 0.0 34.6314   High
cufflinks 0.686933 0.0 5.59536    
cufflinks 5.98372 0.0 26.5815   High
cufflinks 1.84276 0.0 12.1481    
cufflinks 0.943954 0.0 5.32542    
cufflinks 0.303812 0.0 1.98122   Low
cufflinks 0.839628 0.0 4.77499    
cufflinks 6.62435 0.0 27.957   High
cufflinks 2.59996 0.0 13.1998    
cufflinks 1.53        
cufflinks 1.255        
cufflinks 0.628        
cufflinks 0.057     Low Low
cufflinks 0.006     Low Low
cufflinks 0.331        
cufflinks 0.255        
cufflinks 1.343        
cufflinks 0.549        
cufflinks 0.12        
cufflinks 0.224        
cufflinks 2.89       High
cufflinks 0.349        
cufflinks 0.29        
cufflinks 5.13       High
cufflinks 0.22        
cufflinks 4.058       High

0 Strain