Gene : Glyma.06G106000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11649:SF56 - TRNA MODIFICATION GTPASE GTPBP3, MITOCHONDRIAL Genomic Order:  1060
Name:  ? Glyma.06G106000 Secondary Identifier:  ? PAC:30549865
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G106000 0.5kb upstream 0.5kb upstream 4563 true Chr06: 8489792-8494354 Glycine max
Glyma.06G106000 0.5kb upstream 0.5kb upstream 500 false Chr06: 8493855-8494354 Glycine max
Glyma.06G106000 0.5kb downstream 0.5kb downstream 4563 true Chr06: 8489292-8493854 Glycine max
Glyma.06G106000 0.5kb downstream 0.5kb downstream 500 false Chr06: 8489292-8489791 Glycine max
Glyma.06G106000 1.0kb upstream 1.0kb upstream 5063 true Chr06: 8489792-8494854 Glycine max
Glyma.06G106000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 8493855-8494854 Glycine max
Glyma.06G106000 1.0kb downstream 1.0kb downstream 5063 true Chr06: 8488792-8493854 Glycine max
Glyma.06G106000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 8488792-8489791 Glycine max
Glyma.06G106000 2.0kb upstream 2.0kb upstream 6063 true Chr06: 8489792-8495854 Glycine max
Glyma.06G106000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 8493855-8495854 Glycine max
Glyma.06G106000 2.0kb downstream 2.0kb downstream 6063 true Chr06: 8487792-8493854 Glycine max
Glyma.06G106000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 8487792-8489791 Glycine max
Glyma.06G106000 5.0kb upstream 5.0kb upstream 9063 true Chr06: 8489792-8498854 Glycine max
Glyma.06G106000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 8493855-8498854 Glycine max
Glyma.06G106000 5.0kb downstream 5.0kb downstream 9063 true Chr06: 8484792-8493854 Glycine max
Glyma.06G106000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 8484792-8489791 Glycine max
Glyma.06G106000 10.0kb upstream 10.0kb upstream 14063 true Chr06: 8489792-8503854 Glycine max
Glyma.06G106000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 8493855-8503854 Glycine max
Glyma.06G106000 10.0kb downstream 10.0kb downstream 14063 true Chr06: 8479792-8493854 Glycine max
Glyma.06G106000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 8479792-8489791 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310482 5265 Fabidae View MSA
124062172 5270 Rosid View MSA
123739565 5271 Pentapetalae View MSA
122791860 5272 Eudicot View MSA
122042865 5273 Angiosperm View MSA
121344741 5274 Embryophyte View MSA
123428429 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.23511 0.0 7.07053   High
cufflinks 1.67414 0.0 5.52981    
cufflinks 1.13295 0.0 3.91707    
cufflinks 1.55827 0.0 5.19307    
cufflinks 1.609 0.0 5.30888    
cufflinks 0.441631 0.0 1.62768   Low
cufflinks 2.17995 0.0 6.91652    
cufflinks 1.31175 0.0 4.45735    
cufflinks 1.13436 0.0 3.91169    
cufflinks 0.469        
cufflinks 0.206       Low
cufflinks 1.068        
cufflinks 0.632        
cufflinks 1.14        
cufflinks 0.76        
cufflinks 1.452        
cufflinks 0.264       Low
cufflinks 1.198        
cufflinks 1.35        
cufflinks 1.455        
cufflinks 0.285       Low
cufflinks 1.441        
cufflinks 1.685       High
cufflinks 0.156       Low
cufflinks 1.267        
cufflinks 0.216       Low

0 Strain