Gene : Glyma.06G106900 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG0993//KOG4593//KOG4674 - Rab5 GTPase effector Rabaptin-5 // Mitotic checkpoint protein MAD1 // Uncharacterized conserved coiled-coil protein Genomic Order:  1069
Name:  ? Glyma.06G106900 Secondary Identifier:  ? PAC:30553333
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G106900 0.5kb upstream 0.5kb upstream 12247 true Chr06: 8595079-8607325 Glycine max
Glyma.06G106900 0.5kb upstream 0.5kb upstream 500 false Chr06: 8606826-8607325 Glycine max
Glyma.06G106900 0.5kb downstream 0.5kb downstream 12247 true Chr06: 8594579-8606825 Glycine max
Glyma.06G106900 0.5kb downstream 0.5kb downstream 500 false Chr06: 8594579-8595078 Glycine max
Glyma.06G106900 1.0kb upstream 1.0kb upstream 12747 true Chr06: 8595079-8607825 Glycine max
Glyma.06G106900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 8606826-8607825 Glycine max
Glyma.06G106900 1.0kb downstream 1.0kb downstream 12747 true Chr06: 8594079-8606825 Glycine max
Glyma.06G106900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 8594079-8595078 Glycine max
Glyma.06G106900 2.0kb upstream 2.0kb upstream 13747 true Chr06: 8595079-8608825 Glycine max
Glyma.06G106900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 8606826-8608825 Glycine max
Glyma.06G106900 2.0kb downstream 2.0kb downstream 13747 true Chr06: 8593079-8606825 Glycine max
Glyma.06G106900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 8593079-8595078 Glycine max
Glyma.06G106900 5.0kb upstream 5.0kb upstream 16747 true Chr06: 8595079-8611825 Glycine max
Glyma.06G106900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 8606826-8611825 Glycine max
Glyma.06G106900 5.0kb downstream 5.0kb downstream 16747 true Chr06: 8590079-8606825 Glycine max
Glyma.06G106900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 8590079-8595078 Glycine max
Glyma.06G106900 10.0kb upstream 10.0kb upstream 21747 true Chr06: 8595079-8616825 Glycine max
Glyma.06G106900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 8606826-8616825 Glycine max
Glyma.06G106900 10.0kb downstream 10.0kb downstream 21747 true Chr06: 8585079-8606825 Glycine max
Glyma.06G106900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 8585079-8595078 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311061 5265 Fabidae View MSA
124073951 5270 Rosid View MSA
123751263 5271 Pentapetalae View MSA
122794773 5272 Eudicot View MSA
122048313 5273 Angiosperm View MSA
121348283 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.64787 0.0 9.09622    
cufflinks 5.57134 0.0 19.686    
cufflinks 1.4908 0.0 4.71398   Low
cufflinks 9.45504 0.0 31.9629   High
cufflinks 4.85181 0.0 16.7867    
cufflinks 2.19297 0.0 7.67209   Low
cufflinks 8.72761 0.0 28.6186   High
cufflinks 6.59681 0.0 23.9223    
cufflinks 4.88662 0.0 16.9826    
cufflinks 3.149        
cufflinks 0.346       Low
cufflinks 1.366        
cufflinks 2.549        
cufflinks 2.862        
cufflinks 0.699        
cufflinks 2.879        
cufflinks 0.403       Low
cufflinks 2.97        
cufflinks 3.078        
cufflinks 2.598        
cufflinks 0.611       Low
cufflinks 2.951        
cufflinks 3.075        
cufflinks 0.527       Low
cufflinks 2.736        
cufflinks 0.718        

0 Strain