Gene : Glyma.06G098500 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG3117 - Protein involved in rRNA processing Genomic Order:  985
Name:  ? Glyma.06G098500 Secondary Identifier:  ? PAC:30550777
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G098500 0.5kb upstream 0.5kb upstream 4818 true Chr06: 7835850-7840667 Glycine max
Glyma.06G098500 0.5kb upstream 0.5kb upstream 500 false Chr06: 7835850-7836349 Glycine max
Glyma.06G098500 0.5kb downstream 0.5kb downstream 4818 true Chr06: 7836350-7841167 Glycine max
Glyma.06G098500 0.5kb downstream 0.5kb downstream 500 false Chr06: 7840668-7841167 Glycine max
Glyma.06G098500 1.0kb upstream 1.0kb upstream 5318 true Chr06: 7835350-7840667 Glycine max
Glyma.06G098500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 7835350-7836349 Glycine max
Glyma.06G098500 1.0kb downstream 1.0kb downstream 5318 true Chr06: 7836350-7841667 Glycine max
Glyma.06G098500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 7840668-7841667 Glycine max
Glyma.06G098500 2.0kb upstream 2.0kb upstream 6318 true Chr06: 7834350-7840667 Glycine max
Glyma.06G098500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 7834350-7836349 Glycine max
Glyma.06G098500 2.0kb downstream 2.0kb downstream 6318 true Chr06: 7836350-7842667 Glycine max
Glyma.06G098500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 7840668-7842667 Glycine max
Glyma.06G098500 5.0kb upstream 5.0kb upstream 9318 true Chr06: 7831350-7840667 Glycine max
Glyma.06G098500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 7831350-7836349 Glycine max
Glyma.06G098500 5.0kb downstream 5.0kb downstream 9318 true Chr06: 7836350-7845667 Glycine max
Glyma.06G098500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 7840668-7845667 Glycine max
Glyma.06G098500 10.0kb upstream 10.0kb upstream 14318 true Chr06: 7826350-7840667 Glycine max
Glyma.06G098500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 7826350-7836349 Glycine max
Glyma.06G098500 10.0kb downstream 10.0kb downstream 14318 true Chr06: 7836350-7850667 Glycine max
Glyma.06G098500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 7840668-7850667 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300651 5265 Fabidae View MSA
124066836 5270 Rosid View MSA
123740201 5271 Pentapetalae View MSA
122793793 5272 Eudicot View MSA
122047581 5273 Angiosperm View MSA
121345702 5274 Embryophyte View MSA
123380258 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.53257 0.0 16.4485    
cufflinks 4.29207 0.0 20.6625    
cufflinks 1.92406 0.0 12.5816   Low
cufflinks 4.61838 0.0 19.0565    
cufflinks 6.00999 0.0 25.9038   High
cufflinks 4.78761 0.0 19.855    
cufflinks 5.45022 0.0 27.0156    
cufflinks 3.38761 0.0 13.3189    
cufflinks 4.30969 0.0 18.134    
cufflinks 0.458        
cufflinks 0.373       Low
cufflinks 0.724        
cufflinks 1.423       High
cufflinks 1.691       High
cufflinks 0.429        
cufflinks 0.593        
cufflinks 0.468        
cufflinks 0.722        
cufflinks 0.717        
cufflinks 0.497        
cufflinks 0.618        
cufflinks 0.496        
cufflinks 0.598        
cufflinks 0.548        
cufflinks 0.465        
cufflinks 0.591        

0 Strain